RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 A0A0A6YYC8 382 aaPredicted RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 A8MVJ9 347 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 H0YIG0 161 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 I3L1I5 382 aaPredicted RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 CYR61O00622 381 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 CASC3O15234 703 aaKnown RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 SLC16A6O15403 523 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 KIF1CO43896 1103 aaKnown RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 FGF17O60258 216 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 OR10H2O60403 315 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 CTNSO60931 367 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 DNAJB6O75190 326 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 RDH16O75452 317 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 JRKO75564 520 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 SEC24DO94855 1032 aaPredicted RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 CCNB2O95067 398 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 GADD45GO95257 159 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 LDOC1O95751 146 aaPredicted RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 ALPPP05187 535 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 FESP07332 822 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 ALOX5P09917 674 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 SLC35E2P0CK97 266 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 ITGAMP11215 1152 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 ANXA8P13928 327 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 PNLIPP16233 465 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 IFNA8P32881 189 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 XCR1P46094 333 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 OR1E2P47887 323 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 GABRA4P48169 554 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 NR1H2P55055 460 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 CDH12P55289 794 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 GFERP55789 205 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 OR1D5P58170 312 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 RPL11P62913 178 aaKnown RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 TUBA4AP68366 448 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 HSD11B2P80365 405 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 IL1RL1Q01638 556 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 SPIBQ01892 262 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 DUSP2Q05923 314 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 STX4Q12846 297 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 PPP1R8Q12972 351 aaKnown RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 SLC13A2Q13183 592 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 TOP3AQ13472 1001 aaPredicted RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 LTB4RQ15722 352 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 SYPL1Q16563 259 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 TBR1Q16650 682 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 MICAQ29983 383 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 DEFB110Q30KQ9 67 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 KCTD21Q4G0X4 260 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 IQCCQ4KMZ1 466 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF628Q5EBL2 1059 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 NKAIN2Q5VXU1 208 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 KDM4DQ6B0I6 523 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 MFSD12Q6NUT3 480 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 CDC73Q6P1J9 531 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 SHISA2Q6UWI4 295 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 USP51Q70EK9 711 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 PRSS41Q7RTY9 318 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 THAP5Q7Z6K1 395 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF595Q8IYB9 648 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 HS3ST5Q8IZT8 346 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 TAGAPQ8N103 731 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 OR2L13Q8N349 312 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 SMYD1Q8NB12 490 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 PIK3C3Q8NEB9 887 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 OR7G2Q8NG99 324 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 OR5T3Q8NGG3 340 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 OR5D16Q8NGK9 328 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF675Q8TD23 568 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 PHF10Q8WUB8 498 aaKnown RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 C16orf58Q96GQ5 468 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 FBXL20Q96IG2 436 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 CNDP2Q96KP4 475 aaKnown RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF354BQ96LW1 612 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 MUS81Q96NY9 551 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 TRNT1Q96Q11 434 aaKnown RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 MBOAT4Q96T53 435 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 KCNJ15Q99712 375 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 APOL4Q9BPW4 351 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 PELOQ9BRX2 385 aaKnown RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 PINK1Q9BXM7 581 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 AMBRA1Q9C0C7 1298 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 CDIP1Q9H305 208 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 PIGUQ9H490 435 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF556Q9HAH1 456 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 EQTNQ9NQ60 294 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 GIN1Q9NXP7 522 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 KLHL28Q9NXS3 571 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 TUBA8Q9NY65 449 aaPredicted RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 VNN3Q9NY84 501 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 NLGN3Q9NZ94 848 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 ENOPH1Q9UHY7 261 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 SERTAD3Q9UJW9 196 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 TMCC3Q9ULS5 477 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 C19orf53Q9UNZ5 99 aaPredicted RBP6.32□□□□□ -1.4
SLIRP-204ENST00000555890 SLC9A8Q9Y2E8 581 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 TESMINQ9Y4I5 508 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 MAP1AP78559 2803 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 IGHV5-51A0A0C4DH38 117 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms