RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 EIF1P41567 113 aaKnown RBP10.95□□□□□ -0.66
SRP54-206ENST00000555317 LHX2P50458 406 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 SUMO3P55854 103 aaPredicted RBP10.95□□□□□ -0.66
SRP54-206ENST00000555317 RPS3AP61247 264 aaKnown RBP10.95□□□□□ -0.66
SRP54-206ENST00000555317 GUCY1A3Q02108 690 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 ZNF117Q03924 483 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 GNA13Q14344 377 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 CD226Q15762 336 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 BCL2A1Q16548 175 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.95□□□□□ -0.66
SRP54-206ENST00000555317 HIST2H2BCQ6DN03 193 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 HEPHL1Q6MZM0 1159 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 SLC2A7Q6PXP3 512 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 EIF3MQ7L2H7 374 aaKnown RBP10.95□□□□□ -0.66
SRP54-206ENST00000555317 P4HA3Q7Z4N8 544 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 GRAMD2AQ8IUY3 354 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 ZNF619Q8N2I2 560 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 TOR1AIP2Q8NFQ8 470 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 OIT3Q8WWZ8 545 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 LRRC46Q96FV0 321 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 TRNT1Q96Q11 434 aaKnown RBP10.95□□□□□ -0.66
SRP54-206ENST00000555317 TM9SF2Q99805 663 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 TUBA1CQ9BQE3 449 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 TPT1P8Q9HAU6 139 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 MRGBPQ9NV56 204 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 MED17Q9NVC6 651 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 FGFR1OP2Q9NVK5 253 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 THUMPD1Q9NXG2 353 aaKnown RBP10.95□□□□□ -0.66
SRP54-206ENST00000555317 P2RX2Q9UBL9 471 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 CARD8Q9Y2G2 431 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 AP4B1Q9Y6B7 739 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 ANKHD1Q8IWZ3 2542 aaKnown RBP10.95□□□□□ -0.66
SRP54-206ENST00000555317 HEATR5AQ86XA9 2040 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 A0A096LPI6 279 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 A0A0G2JNJ9 132 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 CLCA1A8K7I4 914 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 B4DXG7 233 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 ANGPT2O15123 496 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 EIF4E2O60573 245 aaKnown RBP10.94□□□□□ -0.66
SRP54-206ENST00000555317 FCMRO60667 390 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 H6PDO95479 791 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 CSTAP01040 98 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 GUSBP08236 651 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 TIMP3P35625 211 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 ADH7P40394 386 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 P2RX1P51575 399 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 CLDN18P56856 261 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 B3GALT5-AS1P59052 145 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 DSTNP60981 165 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 CBFBQ13951 182 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 ZNF141Q15928 474 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 PLPPR5Q32ZL2 321 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 SLC25A35Q3KQZ1 300 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 SP5Q6BEB4 398 aaPredicted RBP10.94□□□□□ -0.66
SRP54-206ENST00000555317 TYW3Q6IPR3 259 aaKnown RBP10.94□□□□□ -0.66
SRP54-206ENST00000555317 PPP4R4Q6NUP7 873 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 BLOC1S3Q6QNY0 202 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 GTPBP8Q8N3Z3 284 aaPredicted RBP10.94□□□□□ -0.66
SRP54-206ENST00000555317 LILRB4Q8NHJ6 448 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 ZFP90Q8TF47 636 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 GTF2H4Q92759 462 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 TMEM120AQ9BXJ8 343 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 CALML5Q9NZT1 146 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 Q9UFV3 132 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 SLC35A3Q9Y2D2 325 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 ZNF337Q9Y3M9 751 aa10.94□□□□□ -0.66
SRP54-206ENST00000555317 CACNA1DQ01668 2161 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 MED12LQ86YW9 2145 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 C7orf72A4D263 438 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 NKX2-6A6NCS4 301 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 SLC22A20A6NK97 555 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 SHISA8B8ZZ34 492 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 NPIPB9F8W1W9 429 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 HNRNPRO43390 633 aaKnown RBP10.93□□□□□ -0.66
SRP54-206ENST00000555317 UGT2B17O75795 530 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 UBTFL6P0CB48 400 aaPredicted RBP10.93□□□□□ -0.66
SRP54-206ENST00000555317 BMP5P22003 454 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 PPIBP23284 216 aaKnown RBP10.93□□□□□ -0.66
SRP54-206ENST00000555317 GRNP28799 593 aaKnown RBP10.93□□□□□ -0.66
SRP54-206ENST00000555317 ARFIP2P53365 341 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 CRISP3P54108 245 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 SYPL1Q16563 259 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 SGCBQ16585 318 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 NDUFAF6Q330K2 333 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 COX20Q5RI15 118 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 PDSS1Q5T2R2 415 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 METTL21CQ5VZV1 264 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 ZNF787Q6DD87 383 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 FRRS1Q6ZNA5 592 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 LRRC74BQ6ZQY2 392 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 OLIG3Q7RTU3 272 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 PEX5LQ8IYB4 626 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 TNIP2Q8NFZ5 429 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 OR5W2Q8NH69 310 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 WNT2BQ93097 391 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 AURKBQ96GD4 344 aaPredicted RBP10.93□□□□□ -0.66
SRP54-206ENST00000555317 RNF145Q96MT1 663 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 ZFP3Q96NJ6 502 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.93□□□□□ -0.66
SRP54-206ENST00000555317 SLC6A13Q9NSD5 602 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms