RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 NDUFB10O96000 172 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 TIMP1P01033 207 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 GSTA1P08263 222 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 NSFP46459 744 aaKnown RBP4.43□□□□□ -1.7
PCNX1-205ENST00000553508 ALDH3B2P48448 385 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 PITPNBP48739 271 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 PAGE2BQ5JRK9 111 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 ATRAIDQ6UW56 229 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 TSEN54Q7Z6J9 526 aaKnown RBP4.43□□□□□ -1.7
PCNX1-205ENST00000553508 MCOLN2Q8IZK6 566 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 FAM122AQ96E09 287 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 ZNF285Q96NJ3 590 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 NLNQ9BYT8 704 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 NMUR2Q9GZQ4 415 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 SLC38A10Q9HBR0 1119 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 AKAP7Q9P0M2 348 aaPredicted RBP4.43□□□□□ -1.7
PCNX1-205ENST00000553508 TMEM9Q9P0T7 183 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 RPS6KB2Q9UBS0 482 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 TBX21Q9UL17 535 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 PARP14Q460N5 1801 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 PLXNA1Q9UIW2 1896 aa4.43□□□□□ -1.7
PCNX1-205ENST00000553508 BAZ2AQ9UIF9 1905 aaKnown RBP4.42□□□□□ -1.7
PCNX1-205ENST00000553508 PLIN4Q96Q06 1357 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 WI2-2373I1.2A0A1W2PRP0 233 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 NOL4O94818 638 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 HSPB1P04792 205 aaKnown RBP4.42□□□□□ -1.7
PCNX1-205ENST00000553508 ASGR1P07306 291 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 HIST1H2AGP0C0S8 130 aaPredicted RBP4.42□□□□□ -1.7
PCNX1-205ENST00000553508 OR3A4PP47883 348 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 POU3F4P49335 361 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 BNIP1Q12981 228 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 WSCD1Q658N2 575 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 ARMCX2Q7L311 632 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 SLC22A16Q86VW1 577 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.42□□□□□ -1.7
PCNX1-205ENST00000553508 GPATCH11Q8N954 259 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 P3H4Q92791 437 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 HIST1H2ACQ93077 130 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 C5orf30Q96GV9 206 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 C16orf74Q96GX8 76 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 FAM213AQ9BRX8 229 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 HCAR1Q9BXC0 346 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 NDUFA13Q9P0J0 144 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 APOBEC3BQ9UH17 382 aaKnown RBP4.42□□□□□ -1.7
PCNX1-205ENST00000553508 ZNF175Q9Y473 711 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 TTC41PQ6P2S7 1318 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 TRANK1O15050 2925 aa4.42□□□□□ -1.7
PCNX1-205ENST00000553508 COL11A1P12107 1806 aaPredicted RBP4.42□□□□□ -1.7
PCNX1-205ENST00000553508 NOTCH2Q04721 2471 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 CHD9Q3L8U1 2897 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 A0A1W2PRV1 198 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 SLC17A2O00624 439 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 SNAI1O95863 264 aaPredicted RBP4.41□□□□□ -1.7
PCNX1-205ENST00000553508 PTMSP20962 102 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 MUTP22033 750 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 ATP5DP30049 168 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 RFC2P35250 354 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 NPY2RP49146 381 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 NT5C2P49902 561 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 METAP1P53582 386 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 NLRP11P59045 1033 aaKnown RBP4.41□□□□□ -1.7
PCNX1-205ENST00000553508 GALK2Q01415 458 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 CKAP4Q07065 602 aaKnown RBP4.41□□□□□ -1.7
PCNX1-205ENST00000553508 SMC1AQ14683 1233 aaKnown RBP4.41□□□□□ -1.7
PCNX1-205ENST00000553508 ZKSCAN8Q15776 578 aaPredicted RBP4.41□□□□□ -1.7
PCNX1-205ENST00000553508 GLYR1Q49A26 553 aaPredicted RBP4.41□□□□□ -1.7
PCNX1-205ENST00000553508 CMPK2Q5EBM0 449 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 BNIPLQ7Z465 357 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 FNDC8Q8TC99 324 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 ATP6V1E2Q96A05 226 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 DNAJA3Q96EY1 480 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 ALG9Q9H6U8 611 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 COPS7AQ9UBW8 275 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 CA5BQ9Y2D0 317 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 Q9Y3F1 56 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 DNAH12Q6ZR08 3092 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 MUC6Q6W4X9 2439 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 COL6A3P12111 3177 aa4.41□□□□□ -1.7
PCNX1-205ENST00000553508 ZNFX1Q9P2E3 1918 aaKnown RBP4.4□□□□□ -1.7
PCNX1-205ENST00000553508 MYH4Q9Y623 1939 aa4.4□□□□□ -1.7
PCNX1-205ENST00000553508 MYO9BQ13459 2157 aa4.4□□□□□ -1.7
PCNX1-205ENST00000553508 FAM231BA6NCW3 169 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 CCDC69A6NI79 296 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 IGFBP5P24593 272 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 ACVR1BP36896 505 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 KIAA1024LP59773 190 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 BEX3Q00994 111 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 ZNF674Q2M3X9 581 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 CWC27Q6UX04 472 aaKnown RBP4.4□□□□□ -1.71
PCNX1-205ENST00000553508 CXCL17Q6UXB2 119 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 CCDC170Q8IYT3 715 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 C14orf178Q8N769 122 aaPredicted RBP4.4□□□□□ -1.71
PCNX1-205ENST00000553508 FAM133AQ8N9E0 248 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 TMEM37Q8WXS4 190 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 TECTBQ96PL2 329 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 SDHCQ99643 169 aaPredicted RBP4.4□□□□□ -1.71
PCNX1-205ENST00000553508 TSSK1BQ9BXA7 367 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 PIGVQ9NUD9 493 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 CYP39A1Q9NYL5 469 aa4.4□□□□□ -1.71
PCNX1-205ENST00000553508 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms