RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 ELOA3BQ3SY89 546 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 SPDYAQ5MJ70 313 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 AGAP6Q5VW22 663 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 C11orf71Q6IPW1 123 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 CLEC2AQ6UVW9 174 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 IL17RELQ6ZVW7 336 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 FCRLAQ7L513 359 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 TDRPQ86YL5 185 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 ELOA3Q8NG57 546 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.04□□□□□ -1.12
SYNE2-209ENST00000553308 HOXB13Q92826 284 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-209ENST00000553308 CPNE4Q96A23 557 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-209ENST00000553308 OTUB1Q96FW1 271 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-209ENST00000553308 ADAD1Q96M93 576 aaKnown RBP8.04□□□□□ -1.12
SYNE2-209ENST00000553308 SHARPINQ9H0F6 387 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 CXorf36Q9H7Y0 433 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 COQ10BQ9H8M1 238 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 MYNNQ9NPC7 610 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 ZDHHC18Q9NUE0 388 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 SIRT5Q9NXA8 310 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 LPAR3Q9UBY5 353 aa8.04□□□□□ -1.12
SYNE2-209ENST00000553308 YLPM1P49750 1951 aaKnown RBP8.04□□□□□ -1.12
SYNE2-209ENST00000553308 CADP27708 2225 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 TTC36A6NLP5 189 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 UBFD1O14562 309 aaKnown RBP8.03□□□□□ -1.12
SYNE2-209ENST00000553308 OIP5O43482 229 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 PRKD3O94806 890 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 KCNK2O95069 426 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 ENO1P06733 434 aaKnown RBP8.03□□□□□ -1.12
SYNE2-209ENST00000553308 YES1P07947 543 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 PRPS2P11908 318 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 ENPP1P22413 925 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 IGFBP5P24593 272 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 ELK4P28324 431 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 OR3A2P47893 321 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 SERPINB9P50453 376 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 RNF144AP50876 292 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-209ENST00000553308 PRKAG1P54619 331 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 FOXA1P55317 472 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 SLC7A5Q01650 507 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 ZNF117Q03924 483 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 DUSP5Q16690 384 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 TMEM176BQ3YBM2 270 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-209ENST00000553308 CCNJQ5T5M9 372 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 ANKRD26P1Q6NSI1 321 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 B3GLCTQ6Y288 498 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 Q6ZT83 130 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 SZRD1Q7Z422 152 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 MMGT1Q8N4V1 131 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 SLC16A11Q8NCK7 471 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 ATP6V1C2Q8NEY4 427 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 OR2W6PQ8NHA6 318 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 B4GALNT2Q8NHY0 566 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 DCAKDQ8WVC6 231 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 CIDECQ96AQ7 238 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-209ENST00000553308 EGLN2Q96KS0 407 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 FUT8Q9BYC5 575 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 GP6Q9HCN6 339 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 TIGARQ9NQ88 270 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 CBLN4Q9NTU7 201 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 TMEM216Q9P0N5 145 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 ING1Q9UK53 422 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-209ENST00000553308 NBEAL1Q6ZS30 2694 aa8.03□□□□□ -1.12
SYNE2-209ENST00000553308 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 A0A1W2PNR3 127 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 SERTM1A2A2V5 107 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 SLC35F4A4IF30 521 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 C9JVG2 144 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 E7EQL1 145 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 POC1B-GALNT4F8VUJ3 575 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 SCDO00767 359 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF195O14628 629 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 PDPK1O15530 556 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 LMX1BO60663 402 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 NUDT14O95848 222 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 IFI6P09912 130 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 HPGDP15428 266 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 SLC25A16P16260 332 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 SRD5A1P18405 259 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 TAC1P20366 129 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 COX5AP20674 150 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 IGHV1-2P23083 117 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 TTKP33981 857 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 GPC1P35052 558 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 EIF1P41567 113 aaKnown RBP8.02□□□□□ -1.13
SYNE2-209ENST00000553308 PKNOX1P55347 436 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 DSCR9P59020 149 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 LCP2Q13094 533 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 IMPG1Q17R60 797 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 VPS26BQ4G0F5 336 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF385BQ569K4 471 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 TIMM23BQ5SRD1 257 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 CYB5R2Q6BCY4 276 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 CBLN3Q6UW01 205 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 Q6ZSR9 355 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 MISPQ8IVT2 679 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 CDRT4Q8N9R6 151 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 NUP43Q8NFH3 380 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 FBXO27Q8NI29 283 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 FAM110BQ8TC76 370 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms