RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 CHST2Q9Y4C5 530 aa10.14□□□□□ -0.79
RAB5B-208ENST00000550283 FBN2P35556 2912 aa10.14□□□□□ -0.79
RAB5B-208ENST00000550283 CELSR2Q9HCU4 2923 aa10.14□□□□□ -0.79
RAB5B-208ENST00000550283 SPTBN1Q01082 2364 aaKnown RBP10.13□□□□□ -0.79
RAB5B-208ENST00000550283 A0A096LPI6 279 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 A0A0G2JNJ9 132 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 A0A1W2PQD3 144 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 BCKDKO14874 412 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 TFPTP0C1Z6 253 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 LINGO3P0C6S8 592 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 PSMD4P55036 377 aaKnown RBP10.13□□□□□ -0.79
RAB5B-208ENST00000550283 DSCR4P56555 118 aaPredicted RBP10.13□□□□□ -0.79
RAB5B-208ENST00000550283 STX1BP61266 288 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 C17orf67Q0P5P2 114 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 PLPPR5Q32ZL2 321 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 C1orf185Q5T7R7 199 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 WLSQ5T9L3 541 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 AP1ARQ63HQ0 302 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 ZNF787Q6DD87 383 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 C6orf89Q6UWU4 347 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 MSANTD1Q6ZTZ1 278 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 C16orf62Q7Z3J2 963 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 SPATA21Q7Z572 469 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 COMTD1Q86VU5 262 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 TNIP2Q8NFZ5 429 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 PHOSPHO1Q8TCT1 267 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 CNOT9Q92600 299 aaKnown RBP10.13□□□□□ -0.79
RAB5B-208ENST00000550283 SARAFQ96BY9 339 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 ITCHQ96J02 903 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 SFXN2Q96NB2 322 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 SAR1AQ9NR31 198 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 MED17Q9NVC6 651 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 Q9UFV3 132 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 MRTO4Q9UKD2 239 aaKnown RBP10.13□□□□□ -0.79
RAB5B-208ENST00000550283 DTNAQ9Y4J8 743 aa10.13□□□□□ -0.79
RAB5B-208ENST00000550283 ABCA12Q86UK0 2595 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 A0A1W2PP18 115 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 NKX2-6A6NCS4 301 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 SERINC4A6NH21 518 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 ANKRD65E5RJM6 399 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 CLIC1O00299 241 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 SCDO00767 359 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 HCRTR2O43614 444 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 SNX3O60493 162 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 STX11O75558 287 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 KRT16P08779 473 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 ESRRAP11474 423 aaPredicted RBP10.12□□□□□ -0.79
RAB5B-208ENST00000550283 ZNF708P17019 499 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 ATP6V1C1P21283 382 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 AGFG1P52594 562 aaKnown RBP10.12□□□□□ -0.79
RAB5B-208ENST00000550283 ARFIP2P53365 341 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 FOXF1Q12946 379 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 KLF10Q13118 480 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 SKP2Q13309 424 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 RGNQ15493 299 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 GPAT3Q53EU6 434 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 RAET1LQ5VY80 246 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 BHLHB9Q6PI77 547 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 ADGRE4PQ86SQ3 457 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 GGNQ86UU5 652 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 IFNEQ86WN2 208 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 VRK2Q86Y07 508 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 UBQLNLQ8IYU4 475 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 C9orf106Q8NAJ2 232 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 B4GALNT2Q8NHY0 566 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 GPR119Q8TDV5 335 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 PHF10Q8WUB8 498 aaKnown RBP10.12□□□□□ -0.79
RAB5B-208ENST00000550283 SLC38A5Q8WUX1 472 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 SDCCAG3Q96C92 435 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 ZNF845Q96IR2 970 aaPredicted RBP10.12□□□□□ -0.79
RAB5B-208ENST00000550283 RNF145Q96MT1 663 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 CPPED1Q9BRF8 314 aaPredicted RBP10.12□□□□□ -0.79
RAB5B-208ENST00000550283 SLC39A3Q9BRY0 314 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 NMUR2Q9GZQ4 415 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 TMEM185BQ9H7F4 350 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 RLIMQ9NVW2 624 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 ARMCX1Q9P291 453 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 GMPR2Q9P2T1 348 aaKnown RBP10.12□□□□□ -0.79
RAB5B-208ENST00000550283 USP22Q9UPT9 525 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 ARL2BPQ9Y2Y0 163 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 MRPS18CQ9Y3D5 142 aaKnown RBP10.12□□□□□ -0.79
RAB5B-208ENST00000550283 WDR45Q9Y484 360 aa10.12□□□□□ -0.79
RAB5B-208ENST00000550283 DSPPQ9NZW4 1301 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 DUXAA6NLW8 204 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 CCT8L1PA6NM43 557 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 H3BML4 177 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 FXYD1O00168 92 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 AP3D1O14617 1153 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 ANP32DO95626 131 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 NTN1O95631 604 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 TGM6O95932 706 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 BCHEP06276 602 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 CPN1P15169 458 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 KLK2P20151 261 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 RPS4Y1P22090 263 aaKnown RBP10.11□□□□□ -0.79
RAB5B-208ENST00000550283 LCN1P31025 176 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 PGM1P36871 562 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 CRATP43155 626 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 CASP6P55212 293 aa10.11□□□□□ -0.79
RAB5B-208ENST00000550283 DSTNP60981 165 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms