RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 EXOSC7Q15024 291 aaKnown RBP8.29□□□□□ -1.08
TMEM116-209ENST00000550020 CCNJQ5T5M9 372 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 LCN1P1Q5VSP4 162 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 PRPF38BQ5VTL8 546 aaKnown RBP8.29□□□□□ -1.08
TMEM116-209ENST00000550020 STEAP3Q658P3 488 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 FIGNL1Q6PIW4 674 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 XKRXQ6PP77 449 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 WDR53Q7Z5U6 358 aaPredicted RBP8.29□□□□□ -1.08
TMEM116-209ENST00000550020 BCDIN3DQ7Z5W3 292 aaKnown RBP8.29□□□□□ -1.08
TMEM116-209ENST00000550020 CPOQ8IVL8 374 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 OR8H2Q8N162 312 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 OR9A4Q8NGU2 314 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 PATE1Q8WXA2 126 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 GATAD2BQ8WXI9 593 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 SHDQ96IW2 340 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 PRSS27Q9BQR3 290 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 LRRC61Q9BV99 259 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 PRR14Q9BWN1 585 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 PHF7Q9BWX1 381 aaPredicted RBP8.29□□□□□ -1.08
TMEM116-209ENST00000550020 SLC19A3Q9BZV2 496 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 PDE7BQ9NP56 450 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 CD93Q9NPY3 652 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 CMC2Q9NRP2 79 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 ERVK13-1Q9NX77 482 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 NPAP1Q9NZP6 1156 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 CBLCQ9ULV8 474 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 GPR52Q9Y2T5 361 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 GRIP1Q9Y3R0 1128 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 OR10H1Q9Y4A9 318 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 PCDHGB7Q9Y5F8 929 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 PCDHGB2Q9Y5G2 931 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 MTCH2Q9Y6C9 303 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 DOCK8Q8NF50 2099 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 PRRC2BQ5JSZ5 2229 aaKnown RBP8.29□□□□□ -1.08
TMEM116-209ENST00000550020 COL4A2P08572 1712 aa8.29□□□□□ -1.08
TMEM116-209ENST00000550020 TMEM265A0A087WTH1 108 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 A0A0A6YYC8 382 aaPredicted RBP8.28□□□□□ -1.08
TMEM116-209ENST00000550020 A0A0B4J2E0 115 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 A0A1B0GX12 115 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 DAPL1A0PJW8 107 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 METTL12A8MUP2 240 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 I3L1I5 382 aaPredicted RBP8.28□□□□□ -1.08
TMEM116-209ENST00000550020 PEX12O00623 359 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 BHLHE40O14503 412 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 CASKO14936 926 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 PLD2O14939 933 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 IDH3BO43837 385 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 PIP5K1CO60331 668 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 SLC19A2O60779 497 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 CBX7O95931 251 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 IGF2P01344 180 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 MT-ND5P03915 603 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 PEPDP12955 493 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 TYRP1P17643 537 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 HTR2AP28223 471 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 NOS3P29474 1203 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 ARL4DP49703 201 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 HNRNPKP61978 463 aaKnown RBP eCLIP8.28□□□□□ -1.08
TMEM116-209ENST00000550020 RACK1P63244 317 aaKnown RBP8.28□□□□□ -1.08
TMEM116-209ENST00000550020 HOXC5Q00444 222 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 IFITM3Q01628 133 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 C1orf61Q13536 156 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 DNASE1L3Q13609 305 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 FGFBP1Q14512 234 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 MAPK14Q16539 360 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.28□□□□□ -1.08
TMEM116-209ENST00000550020 LRIT3Q3SXY7 679 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 SOWAHCQ53LP3 525 aaPredicted RBP8.28□□□□□ -1.08
TMEM116-209ENST00000550020 PDZK1Q5T2W1 519 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 C22orf42Q6IC83 251 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 NIPAL3Q6P499 406 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 PLBD1Q6P4A8 553 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 ZNF322Q6U7Q0 402 aaPredicted RBP8.28□□□□□ -1.08
TMEM116-209ENST00000550020 PAMR1Q6UXH9 720 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 PRSS41Q7RTY9 318 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 DGLUCYQ7Z3D6 616 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 OAFQ86UD1 273 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 ARL14Q8N4G2 192 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 ZNF614Q8N883 585 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 ATP6V1C2Q8NEY4 427 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 OR5T3Q8NGG3 340 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 LMX1AQ8TE12 382 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 OTULINQ96BN8 352 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 MVB12AQ96EY5 273 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 ZNF285Q96NJ3 590 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 SECISBP2Q96T21 854 aaKnown RBP8.28□□□□□ -1.08
TMEM116-209ENST00000550020 NEURL2Q9BR09 285 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 NDC1Q9BTX1 674 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 DPH1Q9BZG8 443 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 CHRDQ9H2X0 955 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 TCEAL2Q9H3H9 227 aaPredicted RBP8.28□□□□□ -1.08
TMEM116-209ENST00000550020 RNF167Q9H6Y7 350 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 SOHLH2Q9NX45 425 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 BABAM2Q9NXR7 383 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 HAO2Q9NYQ3 351 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 GMEB2Q9UKD1 530 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 PAIP2BQ9ULR5 123 aaKnown RBP8.28□□□□□ -1.08
TMEM116-209ENST00000550020 MMACHCQ9Y4U1 282 aa8.28□□□□□ -1.08
TMEM116-209ENST00000550020 NUMA1Q14980 2115 aa8.27□□□□□ -1.08
TMEM116-209ENST00000550020 IGHV1OR15-9A0A0B4J2B8 117 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms