RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 GFRA3O60609 400 aa27.94■■■□□ 2.06
CCM2-219ENST00000544363 OR1Q1Q15612 314 aa27.94■■■□□ 2.06
CCM2-219ENST00000544363 CD226Q15762 336 aa27.94■■■□□ 2.06
CCM2-219ENST00000544363 SLC36A3Q495N2 470 aa27.94■■■□□ 2.06
CCM2-219ENST00000544363 ZNF770Q6IQ21 691 aaPredicted RBP27.94■■■□□ 2.06
CCM2-219ENST00000544363 PODNL1Q6PEZ8 512 aa27.94■■■□□ 2.06
CCM2-219ENST00000544363 FAM71CQ8NEG0 241 aa27.94■■■□□ 2.06
CCM2-219ENST00000544363 CYGBQ8WWM9 190 aa27.94■■■□□ 2.06
CCM2-219ENST00000544363 A0A1W2PQD3 144 aa27.93■■■□□ 2.06
CCM2-219ENST00000544363 SH3PXD2BA1X283 911 aa27.93■■■□□ 2.06
CCM2-219ENST00000544363 H3BNH8 94 aa27.93■■■□□ 2.06
CCM2-219ENST00000544363 MITFO75030 526 aaPredicted RBP27.93■■■□□ 2.06
CCM2-219ENST00000544363 HPP00738 406 aa27.93■■■□□ 2.06
CCM2-219ENST00000544363 GDF7Q7Z4P5 450 aa27.93■■■□□ 2.06
CCM2-219ENST00000544363 DTX1Q86Y01 620 aa27.93■■■□□ 2.06
CCM2-219ENST00000544363 ZNF440Q8IYI8 595 aa27.93■■■□□ 2.06
CCM2-219ENST00000544363 GATSQ8NAP1 163 aa27.93■■■□□ 2.06
CCM2-219ENST00000544363 SLC22A8Q8TCC7 542 aa27.93■■■□□ 2.06
CCM2-219ENST00000544363 PHOSPHO1Q8TCT1 267 aa27.93■■■□□ 2.06
CCM2-219ENST00000544363 KRT84Q9NSB2 600 aa27.93■■■□□ 2.06
CCM2-219ENST00000544363 FBXL4Q9UKA2 621 aa27.93■■■□□ 2.06
CCM2-219ENST00000544363 AHCTF1Q8WYP5 2266 aa27.93■■■□□ 2.06
CCM2-219ENST00000544363 TRAPPC13A5PLN9 417 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 ALG1L2C9J202 215 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 ADAM11O75078 769 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 OR2J2O76002 312 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 THY1P04216 161 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 UBL4AP11441 157 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 ICAM2P13598 275 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 CAPGP40121 348 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 ADARB1P78563 741 aaKnown RBP27.92■■■□□ 2.06
CCM2-219ENST00000544363 IL10RAQ13651 578 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 NDUFAF6Q330K2 333 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 GALNT5Q7Z7M9 940 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 LINC00471Q8N535 108 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 SLC15A4Q8N697 577 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 IL22RA1Q8N6P7 574 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 POGLUT1Q8NBL1 392 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 SLC38A4Q969I6 547 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 MBOAT4Q96T53 435 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 P4HTMQ9NXG6 502 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 H0YAE9 185 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 FADS1O60427 444 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 CBLP22681 906 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 MARVELD2Q8N4S9 558 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 TOR1AIP2Q8NFQ8 470 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 TRIM2Q9C040 744 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 TMEM27Q9HBJ8 222 aa27.92■■■□□ 2.06
CCM2-219ENST00000544363 MRPS18BQ9Y676 258 aaKnown RBP27.92■■■□□ 2.06
CCM2-219ENST00000544363 GTPBP1O00178 669 aaKnown RBP27.91■■■□□ 2.06
CCM2-219ENST00000544363 OR10H3O60404 316 aa27.91■■■□□ 2.06
CCM2-219ENST00000544363 TMED10P49755 219 aaKnown RBP27.91■■■□□ 2.06
CCM2-219ENST00000544363 FBXW4P57775 412 aa27.91■■■□□ 2.06
CCM2-219ENST00000544363 IL1RL1Q01638 556 aa27.91■■■□□ 2.06
CCM2-219ENST00000544363 LYPD8Q6UX82 237 aa27.91■■■□□ 2.06
CCM2-219ENST00000544363 MRGPREQ86SM8 312 aa27.91■■■□□ 2.06
CCM2-219ENST00000544363 RAB43Q86YS6 212 aa27.91■■■□□ 2.06
CCM2-219ENST00000544363 CHERPQ8IWX8 916 aaKnown RBP27.91■■■□□ 2.06
CCM2-219ENST00000544363 AQP11Q8NBQ7 271 aa27.91■■■□□ 2.06
CCM2-219ENST00000544363 CNBD2Q96M20 576 aa27.91■■■□□ 2.06
CCM2-219ENST00000544363 ANKRD60Q9BZ19 345 aa27.91■■■□□ 2.06
CCM2-219ENST00000544363 TBL1XR1Q9BZK7 514 aa27.91■■■□□ 2.06
CCM2-219ENST00000544363 ZNF556Q9HAH1 456 aa27.91■■■□□ 2.06
CCM2-219ENST00000544363 EXOSC3Q9NQT5 275 aaKnown RBP27.91■■■□□ 2.06
CCM2-219ENST00000544363 SLC7A7Q9UM01 511 aa27.91■■■□□ 2.06
CCM2-219ENST00000544363 ZNF264O43296 627 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 GASTP01350 101 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 CDH2P19022 906 aaPredicted RBP27.9■■■□□ 2.06
CCM2-219ENST00000544363 ENDOUP21128 410 aaKnown RBP27.9■■■□□ 2.06
CCM2-219ENST00000544363 EVI2BP34910 448 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 KCNAB2Q13303 367 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 SKP2Q13309 424 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 ZNF613Q6PF04 617 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 NUP54Q7Z3B4 507 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 LSMEM1Q8N8F7 131 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 HGDQ93099 445 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 ARSGQ96EG1 525 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 RASL10BQ96S79 203 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 NIPSNAP1Q9BPW8 284 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 FAM118AQ9NWS6 357 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 MGAT4BQ9UQ53 548 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 CFAP54Q96N23 3096 aa27.9■■■□□ 2.06
CCM2-219ENST00000544363 DXOO77932 396 aaKnown RBP27.89■■■□□ 2.06
CCM2-219ENST00000544363 MARCH3Q86UD3 253 aa27.89■■■□□ 2.06
CCM2-219ENST00000544363 NKAIN4Q8IVV8 208 aa27.89■■■□□ 2.06
CCM2-219ENST00000544363 OR4K5Q8NGD3 323 aa27.89■■■□□ 2.06
CCM2-219ENST00000544363 TTC9Q92623 222 aa27.89■■■□□ 2.06
CCM2-219ENST00000544363 TMCO6Q96DC7 493 aa27.89■■■□□ 2.06
CCM2-219ENST00000544363 RTN4RQ9BZR6 473 aa27.89■■■□□ 2.06
CCM2-219ENST00000544363 PAPOLBQ9NRJ5 636 aaKnown RBP27.89■■■□□ 2.06
CCM2-219ENST00000544363 IL17BQ9UHF5 180 aa27.89■■■□□ 2.06
CCM2-219ENST00000544363 CARD8Q9Y2G2 431 aa27.89■■■□□ 2.06
CCM2-219ENST00000544363 POFUT2Q9Y2G5 429 aa27.89■■■□□ 2.06
CCM2-219ENST00000544363 A0A087WUU8 490 aa27.89■■■□□ 2.05
CCM2-219ENST00000544363 OIP5O43482 229 aa27.89■■■□□ 2.05
CCM2-219ENST00000544363 NDUFB5O43674 189 aa27.89■■■□□ 2.05
CCM2-219ENST00000544363 RPSAP08865 295 aaKnown RBP27.89■■■□□ 2.05
CCM2-219ENST00000544363 FBXO45P0C2W1 286 aa27.89■■■□□ 2.05
CCM2-219ENST00000544363 PDK3Q15120 406 aa27.89■■■□□ 2.05
CCM2-219ENST00000544363 TTC23Q5W5X9 447 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms