RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 TMX2-CTNND1H3BSU7 103 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 TRMUO75648 421 aaKnown RBP8.6□□□□□ -1.03
GNE-206ENST00000543356 OSMP13725 252 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 HTR2AP28223 471 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 HLCSP50747 726 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 GPR143P51810 404 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 E2F1Q01094 437 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 ALDH6A1Q02252 535 aaKnown RBP8.6□□□□□ -1.03
GNE-206ENST00000543356 COX10Q12887 443 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 MAD2L1BPQ15013 274 aaPredicted RBP8.6□□□□□ -1.03
GNE-206ENST00000543356 SF3B4Q15427 424 aaKnown RBP eCLIP8.6□□□□□ -1.03
GNE-206ENST00000543356 MEP1AQ16819 746 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 LAIR2Q6ISS4 152 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 SHISA6Q6ZSJ9 500 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 SLC29A4Q7RTT9 530 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 CCDC71Q8IV32 467 aaPredicted RBP8.6□□□□□ -1.03
GNE-206ENST00000543356 ZNF441Q8N8Z8 693 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 METTL21AQ8WXB1 218 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 ACOT11Q8WXI4 607 aaPredicted RBP8.6□□□□□ -1.03
GNE-206ENST00000543356 PRR14Q9BWN1 585 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 SEMA4CQ9C0C4 833 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 A0A087WUU8 490 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 A6NL46 340 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 CNOT3O75175 753 aaKnown RBP8.6□□□□□ -1.03
GNE-206ENST00000543356 MTRF1O75570 445 aaKnown RBP8.6□□□□□ -1.03
GNE-206ENST00000543356 THY1P04216 161 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 CCL4P13236 92 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 PRG2P13727 222 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 POU2F1P14859 743 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 ZNF28P17035 718 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 GSTM3P21266 225 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 PRKACBP22694 351 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 CRHBPP24387 322 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 RPL5P46777 297 aaKnown RBP8.6□□□□□ -1.03
GNE-206ENST00000543356 CRISP1P54107 249 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 EMP2P54851 167 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 CXCR4P61073 352 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 HOXC5Q00444 222 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 TEKQ02763 1124 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 CDK5R2Q13319 367 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 SIGIRRQ6IA17 410 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 LCN10Q6JVE6 187 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 ZNF613Q6PF04 617 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 TMEM205Q6UW68 189 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 DCDC5Q6ZRR9 648 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 DEPDC4Q8N2C3 294 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 ZNF527Q8NB42 609 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 NFAM1Q8NET5 270 aaPredicted RBP8.6□□□□□ -1.03
GNE-206ENST00000543356 CNOT9Q92600 299 aaKnown RBP8.6□□□□□ -1.03
GNE-206ENST00000543356 RNF31Q96EP0 1072 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 CDC6Q99741 560 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 CMKLR1Q99788 373 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 STRADBQ9C0K7 418 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 SLC39A1Q9NY26 324 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 SLC35A3Q9Y2D2 325 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 NTNG1Q9Y2I2 539 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 SERINC4A6NH21 518 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 ZAR1LA6NP61 321 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 CDK2AP1O14519 115 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 GDF9O60383 454 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 BCAS1O75363 584 aaPredicted RBP8.59□□□□□ -1.03
GNE-206ENST00000543356 RFPL3O75679 317 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 LYPD3O95274 346 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 CCDC159P0C7I6 412 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 GKN3PP0CG01 181 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 ATP6V1B1P15313 513 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 MMP11P24347 488 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 CHMP24386 653 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 ADH7P40394 386 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 NR1H2P55055 460 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 RAB15P59190 212 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 TARDBPQ13148 414 aaKnown RBP eCLIP8.59□□□□□ -1.03
GNE-206ENST00000543356 OR1Q1Q15612 314 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 KLHL26Q53HC5 615 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 CDCP2Q5VXM1 449 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 HLA-DQA1Q5Y7H0 255 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 MBOAT2Q6ZWT7 520 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 ZNF550Q7Z398 422 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 ZER1Q7Z7L7 766 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 SLCO6A1Q86UG4 719 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 B3GNT7Q8NFL0 401 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 PIGXQ8TBF5 258 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 GNPDA2Q8TDQ7 276 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 GIMAP1Q8WWP7 306 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 GAL3ST4Q96RP7 486 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 CRB3Q9BUF7 120 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 LIN28AQ9H9Z2 209 aaKnown RBP8.59□□□□□ -1.03
GNE-206ENST00000543356 UBQLN4Q9NRR5 601 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 ZMAT5Q9UDW3 170 aaKnown RBP8.59□□□□□ -1.03
GNE-206ENST00000543356 C19orf25Q9UFG5 118 aaPredicted RBP8.59□□□□□ -1.03
GNE-206ENST00000543356 PCDHGA3Q9Y5H0 932 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 SLC1A7O00341 560 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 KLK3P07288 261 aaPredicted RBP8.59□□□□□ -1.03
GNE-206ENST00000543356 CDH15P55291 814 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 TUBA1BP68363 451 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 INSM1Q01101 510 aaPredicted RBP8.59□□□□□ -1.03
GNE-206ENST00000543356 PTGES3Q15185 160 aaKnown RBP8.59□□□□□ -1.03
GNE-206ENST00000543356 KCNJ8Q15842 424 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 FNDC7Q5VTL7 733 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 FAM198BQ6UWH4 519 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms