RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 LIPT1Q9Y234 373 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 AP4B1Q9Y6B7 739 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 FREM1Q5H8C1 2179 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 UQCRHLA0A096LP55 91 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 PRAMEF27A3QJZ7 478 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 SERINC4A6NH21 518 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 FAM90A27PA6NNH2 459 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 CLCA1A8K7I4 914 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 OIP5O43482 229 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 EIF4E2O60573 245 aaKnown RBP11.83□□□□□ -0.52
LTBR-208ENST00000541005 FCMRO60667 390 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 UGT2B17O75795 530 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 IL18BPO95998 194 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 GSNP06396 782 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 LINGO3P0C6S8 592 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 TCEA1P23193 301 aaKnown RBP11.83□□□□□ -0.52
LTBR-208ENST00000541005 P2RX1P51575 399 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 ZNF41P51814 821 aaPredicted RBP11.83□□□□□ -0.52
LTBR-208ENST00000541005 ZNF136P52737 540 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 CASP9P55211 416 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 CLDN15P56746 228 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 SRYQ05066 204 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 SQLEQ14534 574 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 PDZK1Q5T2W1 519 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 POMZP3Q6PJE2 187 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 CBLN3Q6UW01 205 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 DNAJC14Q6Y2X3 702 aaPredicted RBP11.83□□□□□ -0.52
LTBR-208ENST00000541005 FRRS1Q6ZNA5 592 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 ZNF621Q6ZSS3 439 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 LIX1LQ8IVB5 337 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 FUNDC1Q8IVP5 155 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 ZNF619Q8N2I2 560 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 MEIOBQ8N635 442 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 FAM71CQ8NEG0 241 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 XAGE5Q8WWM1 108 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 GTF2H4Q92759 462 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 WNT2BQ93097 391 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 VPS33AQ96AX1 596 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 ARSGQ96EG1 525 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 SH3YL1Q96HL8 342 aaPredicted RBP11.83□□□□□ -0.52
LTBR-208ENST00000541005 TRNT1Q96Q11 434 aaKnown RBP11.83□□□□□ -0.52
LTBR-208ENST00000541005 TRIB1Q96RU8 372 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 TM9SF2Q99805 663 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 SPOCK3Q9BQ16 436 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 KLHDC3Q9BQ90 382 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 ZNF385DQ9H6B1 395 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 KCNJ16Q9NPI9 418 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 SLC52A3Q9NQ40 469 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 NPDC1Q9NQX5 325 aaPredicted RBP11.83□□□□□ -0.52
LTBR-208ENST00000541005 ZNF629Q9UEG4 869 aaPredicted RBP11.83□□□□□ -0.52
LTBR-208ENST00000541005 MKLN1Q9UL63 735 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 VDAC3Q9Y277 283 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 ZNF337Q9Y3M9 751 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 WDR45Q9Y484 360 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 ABCA4P78363 2273 aa11.83□□□□□ -0.52
LTBR-208ENST00000541005 APCP25054 2843 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 A0A096LPI6 279 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 CENPVL1A0A0U1RR11 272 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 NKX2-6A6NCS4 301 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 ETV2O00321 342 aaPredicted RBP11.82□□□□□ -0.52
LTBR-208ENST00000541005 ZNF264O43296 627 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 ATP8B1O43520 1251 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 NTN1O95631 604 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 IL2RAP01589 272 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 UBL4AP11441 157 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 ELK4P28324 431 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 EIF1P41567 113 aaKnown RBP11.82□□□□□ -0.52
LTBR-208ENST00000541005 EEFSECP57772 596 aaKnown RBP11.82□□□□□ -0.52
LTBR-208ENST00000541005 HPCAP84074 193 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 SKP2Q13309 424 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 FGFBP1Q14512 234 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 GPR68Q15743 365 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 FBXL19-AS1Q494R0 122 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 HSP90B2PQ58FF3 399 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 COX20Q5RI15 118 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 LRIF1Q5T3J3 769 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 GGNQ86UU5 652 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 METTL25Q8N6Q8 603 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 C9orf106Q8NAJ2 232 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 RELL2Q8NC24 303 aaPredicted RBP11.82□□□□□ -0.52
LTBR-208ENST00000541005 OR5M1Q8NGP8 315 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 PMM1Q92871 262 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 MARVELD3Q96A59 401 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 UCK2Q9BZX2 261 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 LAT2Q9GZY6 243 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 PAIP1Q9H074 479 aaKnown RBP11.82□□□□□ -0.52
LTBR-208ENST00000541005 RABEP2Q9H5N1 569 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 CCDC134Q9H6E4 229 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 TPT1P8Q9HAU6 139 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 NPHS2Q9NP85 383 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 STOML1Q9UBI4 398 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 L3MBTL1Q9Y468 752 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 ZNF175Q9Y473 711 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 GMEB1Q9Y692 573 aa11.82□□□□□ -0.52
LTBR-208ENST00000541005 H3BML4 177 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 DVL2O14641 736 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 GMFGO60234 142 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 RCBTB2O95199 551 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 H6PDO95479 791 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 COX6B1P14854 86 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms