RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 PABPC4LP0CB38 370 aaKnown RBP11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 CRYGSP22914 178 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 PSMA4P25789 261 aaKnown RBP11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 SLC6A8P48029 635 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 CARD18P57730 90 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 TP53BP2Q13625 1128 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 EXOC3L2Q2M3D2 409 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 HBMQ6B0K9 141 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 NUDCD3Q8IVD9 361 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 LILRA2Q8N149 483 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 OR6K3Q8NGY3 331 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 OR2V1Q8NHB1 315 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 PHOSPHO1Q8TCT1 267 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 OSTF1Q92882 214 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 CAVIN3Q969G5 261 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 PIGTQ969N2 578 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 OTUB1Q96FW1 271 aaPredicted RBP11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 REXO5Q96IC2 774 aaKnown RBP11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 RNF145Q96MT1 663 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 C1orf50Q9BV19 199 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 KLHL4Q9C0H6 718 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 BHLHE41Q9C0J9 482 aaPredicted RBP11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 GIMAP2Q9UG22 337 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 A0A1W2PPR1 153 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 DUXAA6NLW8 204 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 GJE1A6NN92 205 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 DEFB108AA8MXU0 73 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 GTPBP1O00178 669 aaKnown RBP11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 TNFSF11O14788 317 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 ARHGEF9O43307 516 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 TYROBPO43914 113 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 CXCL13O43927 109 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 SS18L1O75177 396 aaPredicted RBP11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 SKAP2O75563 359 aaPredicted RBP11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 NUDT14O95848 222 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 C6orf47O95873 294 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 LINGO3P0C6S8 592 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 PPP3CBP16298 524 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 FPR1P21462 350 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 ADH6P28332 368 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 HOXC12P31275 282 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 NKX6-1P78426 367 aaPredicted RBP11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 EMX2Q04743 252 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 CD226Q15762 336 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 SMU1Q2TAY7 513 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 CTU2Q2VPK5 515 aaKnown RBP11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 KLHL26Q53HC5 615 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 DCST2Q5T1A1 773 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 SHEQ5VZ18 495 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 WDR93Q6P2C0 686 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 BEND4Q6ZU67 534 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 STK32CQ86UX6 486 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 KRTCAP2Q8N6L1 136 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 SFXN5Q8TD22 340 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 AENQ8WTP8 325 aaKnown RBP11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 PIK3IP1Q96FE7 263 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 ADGRG7Q96K78 797 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 KLHL15Q96M94 604 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 ZIM3Q96PE6 472 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 DUSP26Q9BV47 211 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 TMEM109Q9BVC6 243 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 CXorf36Q9H7Y0 433 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 GPATCH2Q9NW75 528 aa11.12□□□□□ -0.63
CAPRIN1-213ENST00000533562 A0A0J9YW62 118 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 SNUPNO95149 360 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 G6PDP11413 515 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 CREB1P16220 341 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 ELK4P28324 431 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 ARRB2P32121 409 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 ETV4P43268 484 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 P2RX1P51575 399 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 ATP12AP54707 1039 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 SUMO3P55854 103 aaPredicted RBP11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 CLDN8P56748 225 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 ZNF117Q03924 483 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 ACKR1Q16570 336 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 PGS1Q32NB8 556 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 ANKRD34AQ69YU3 496 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 ZNF550Q7Z398 422 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 RIMKLAQ8IXN7 391 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 WFDC11Q8NEX6 87 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 ZC3HAV1LQ96H79 300 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 NPAS1Q99742 590 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 PIP5K1AQ99755 562 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 TMEM185BQ9H7F4 350 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 DLL4Q9NR61 685 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 NOP53Q9NZM5 478 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 CLEC4AQ9UMR7 237 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 PCDHGB4Q9UN71 923 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 CARD8Q9Y2G2 431 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 DTNAQ9Y4J8 743 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 ACTL7BQ9Y614 415 aa11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 GPC6Q9Y625 555 aaPredicted RBP11.11□□□□□ -0.63
CAPRIN1-213ENST00000533562 ZNF195O14628 629 aa11.1□□□□□ -0.63
CAPRIN1-213ENST00000533562 SMPD2O60906 423 aa11.1□□□□□ -0.63
CAPRIN1-213ENST00000533562 TUBBP07437 444 aa11.1□□□□□ -0.63
CAPRIN1-213ENST00000533562 CCKARP32238 428 aa11.1□□□□□ -0.63
CAPRIN1-213ENST00000533562 SFTPDP35247 375 aa11.1□□□□□ -0.63
CAPRIN1-213ENST00000533562 C21orf58P58505 322 aa11.1□□□□□ -0.63
CAPRIN1-213ENST00000533562 HBA1P69905 142 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms