RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 C16orf58Q96GQ5 468 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 SAMD8Q96LT4 415 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 ZNF226Q9NYT6 803 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 PCDHB10Q9UN67 800 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 SLC6A5Q9Y345 797 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 SCRG1O75711 98 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 UGT2B7P16662 529 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 PCBD1P61457 104 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 CHPT1Q8WUD6 406 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 HINT2Q9BX68 163 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 GPN2Q9H9Y4 310 aaPredicted RBP13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 UBQLN4Q9NRR5 601 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 NME4O00746 187 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 PCDH17O14917 1159 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 EEF1A1P68104 462 aaKnown RBP13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 EIF2B1Q14232 305 aaKnown RBP13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 ZNF423Q2M1K9 1284 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 CPZQ66K79 652 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 VRK3Q8IV63 474 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 PLEK2Q9NYT0 353 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 CBLCQ9ULV8 474 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 HOXA9P31269 272 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 KIAA0907Q7Z7F0 614 aaPredicted RBP13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 ADOQ96SZ5 270 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 INIPQ9NRY2 104 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 ARMC1Q9NVT9 282 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 MYEF2Q9P2K5 600 aaKnown RBP13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 NUP50Q9UKX7 468 aa13.88□□□□□ -0.19
PCDHA9-202ENST00000532602 TRAV6A0A075B6T7 132 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 LSM1O15116 133 aaKnown RBP13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 PTHP01270 115 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 CD97P48960 835 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 SNTB2Q13425 540 aaKnown RBP13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 OR5K2Q8NHB8 316 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 OR10A5Q9H207 317 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 OR10A2Q9H208 303 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 AGAP5A6NIR3 686 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 IFNA1P01562 189 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 UQCRC1P31930 480 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 MAGEA6P43360 314 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 HLCSP50747 726 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 PIN1Q13526 163 aaPredicted RBP13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 RHEBQ15382 184 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 OR7A5Q15622 319 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 MICAQ29983 383 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 FBXO27Q8NI29 283 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 MUCL1Q96DR8 90 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 ZNF285Q96NJ3 590 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 FOXN4Q96NZ1 517 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 SORT1Q99523 831 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 ADAM29Q9UKF5 820 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 EMCNQ9ULC0 261 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 PCDHGA7Q9Y5G6 932 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 RRP8O43159 456 aaKnown RBP13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 HTR3BO95264 441 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 POLR2HP52434 150 aaKnown RBP13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 Q8N402 240 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 LILRA3Q8N6C8 439 aaPredicted RBP13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 CCDC71LQ8N9Z2 235 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 BTBD2Q9BX70 525 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 RAD1O60671 282 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 CPOXP36551 454 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 OR5H2Q8NGV7 314 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 ASB11Q8WXH4 323 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 AMDHD1Q96NU7 426 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 FAM155AB1AL88 458 aaPredicted RBP13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 CPMP14384 443 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 CNR2P34972 360 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 ZNF534Q76KX8 674 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 SYT14Q8NB59 555 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 PAPD5Q8NDF8 572 aaKnown RBP13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 FER1L6-AS2Q96M78 137 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 PHOX2BQ99453 314 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 NMNAT1Q9HAN9 279 aaPredicted RBP13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 IL37Q9NZH6 218 aa13.87□□□□□ -0.19
PCDHA9-202ENST00000532602 K7ESM1 405 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 CHMP24386 653 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 MAP2K3P46734 347 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 PLGLAQ15195 96 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 UGT8Q16880 541 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 SLC35F2Q8IXU6 374 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 CNEP1R1Q8N9A8 125 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 PDLIM5Q96HC4 596 aaKnown RBP13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 SLC6A16Q9GZN6 736 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 DYNLRB1Q9NP97 96 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 CNOT11Q9UKZ1 510 aaKnown RBP13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 PRKRAO75569 313 aaKnown RBP13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 IL32P24001 234 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 PIP5KL1Q5T9C9 394 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 C6orf89Q6UWU4 347 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 LINC01465Q8N7H1 131 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 OR13H1Q8NG92 308 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 GPR148Q8TDV2 347 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 MRI1Q9BV20 369 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 REV1Q9UBZ9 1251 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 SERPINA11Q86U17 422 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 KCND3Q9UK17 655 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 F5H5K5 113 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 KIAA0513O60268 411 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms