RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 GEMIN6Q8WXD5 167 aaKnown RBP9.75□□□□□ -0.85
SOX6-213ENST00000530378 EXTL1Q92935 676 aa9.75□□□□□ -0.85
SOX6-213ENST00000530378 RELTQ969Z4 430 aa9.75□□□□□ -0.85
SOX6-213ENST00000530378 JSRP1Q96MG2 331 aaPredicted RBP9.75□□□□□ -0.85
SOX6-213ENST00000530378 UTP23Q9BRU9 249 aaKnown RBP9.75□□□□□ -0.85
SOX6-213ENST00000530378 CHID1Q9BWS9 393 aa9.75□□□□□ -0.85
SOX6-213ENST00000530378 AMBRA1Q9C0C7 1298 aa9.75□□□□□ -0.85
SOX6-213ENST00000530378 SEMA6AQ9H2E6 1030 aa9.75□□□□□ -0.85
SOX6-213ENST00000530378 KLHL1Q9NR64 748 aa9.75□□□□□ -0.85
SOX6-213ENST00000530378 LRFN1Q9P244 771 aa9.75□□□□□ -0.85
SOX6-213ENST00000530378 ABI3Q9P2A4 366 aa9.75□□□□□ -0.85
SOX6-213ENST00000530378 AP4S1Q9Y587 144 aa9.75□□□□□ -0.85
SOX6-213ENST00000530378 CPSF4LA6NMK7 179 aaKnown RBP9.74□□□□□ -0.85
SOX6-213ENST00000530378 B4DXG7 233 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 ADAM10O14672 748 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 GNB5O14775 395 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 CDC40O60508 579 aaKnown RBP eCLIP9.74□□□□□ -0.85
SOX6-213ENST00000530378 TPST2O60704 377 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 NTN1O95631 604 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 LGI1O95970 557 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 SEMG1P04279 462 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 IFNW1P05000 195 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 FABP3P05413 133 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 RAP2AP10114 183 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 SLC7A1P30825 629 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 RFC3P40938 356 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 CASRP41180 1078 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 CD97P48960 835 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 DNASE1L1P49184 302 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 HLCSP50747 726 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 PSPHP78330 225 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 ARG2P78540 354 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 EIPR1Q53HC9 387 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 RNF220Q5VTB9 566 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 FNDC7Q5VTL7 733 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 RTL4Q6ZR62 310 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 TSEN54Q7Z6J9 526 aaKnown RBP9.74□□□□□ -0.85
SOX6-213ENST00000530378 AMIGO2Q86SJ2 522 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 PSD4Q8NDX1 1056 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 OR52E4Q8NGH9 312 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 DUSP19Q8WTR2 217 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 APOBEC4Q8WW27 367 aaKnown RBP9.74□□□□□ -0.85
SOX6-213ENST00000530378 RASSF5Q8WWW0 418 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 LRTOMTQ8WZ04 291 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 ARHGDIGQ99819 225 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 OSBPL11Q9BXB4 747 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 HOXD1Q9GZZ0 328 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.74□□□□□ -0.85
SOX6-213ENST00000530378 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.74□□□□□ -0.85
SOX6-213ENST00000530378 CCM2LQ9NUG4 571 aaPredicted RBP9.74□□□□□ -0.85
SOX6-213ENST00000530378 KLHL28Q9NXS3 571 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 NKX1-2Q9UD57 310 aaPredicted RBP9.74□□□□□ -0.85
SOX6-213ENST00000530378 SLC9A8Q9Y2E8 581 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 TESMINQ9Y4I5 508 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 BSNQ9UPA5 3926 aa9.74□□□□□ -0.85
SOX6-213ENST00000530378 TLN1Q9Y490 2541 aaKnown RBP9.73□□□□□ -0.85
SOX6-213ENST00000530378 ALG1L2C9J202 215 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 K7ENP7 123 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 SEMA7AO75326 666 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 SLC25A12O75746 678 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 NUDT14O95848 222 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 NAGAP17050 411 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 HTR2AP28223 471 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 PTGDSP41222 190 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 CASP3P42574 277 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 IST1P53990 364 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 FOXK1P85037 733 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 SKP2Q13309 424 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 LAPTM4AQ15012 233 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 NRF1Q16656 503 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 INO80CQ6PI98 192 aaPredicted RBP9.73□□□□□ -0.85
SOX6-213ENST00000530378 LILRA2Q8N149 483 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 CADM2Q8N3J6 435 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 CATSPER1Q8NEC5 780 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 RNF217Q8TC41 542 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 C7orf34Q96L11 122 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 PKP2Q99959 881 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 VNN3Q9NY84 501 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 MED11Q9P086 117 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 PPP4R1LQ9P1A2 415 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 CNOT11Q9UKZ1 510 aaKnown RBP9.73□□□□□ -0.85
SOX6-213ENST00000530378 U3KQV3 271 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 NBEAQ8NFP9 2946 aa9.73□□□□□ -0.85
SOX6-213ENST00000530378 H3BNH8 94 aa9.72□□□□□ -0.85
SOX6-213ENST00000530378 K7EM74 188 aa9.72□□□□□ -0.85
SOX6-213ENST00000530378 ZNF264O43296 627 aa9.72□□□□□ -0.85
SOX6-213ENST00000530378 NEURL1O76050 574 aa9.72□□□□□ -0.85
SOX6-213ENST00000530378 PDGFAP04085 211 aa9.72□□□□□ -0.85
SOX6-213ENST00000530378 UMPSP11172 480 aa9.72□□□□□ -0.85
SOX6-213ENST00000530378 MASP1P48740 699 aa9.72□□□□□ -0.85
SOX6-213ENST00000530378 CLK3P49761 638 aaKnown RBP9.72□□□□□ -0.85
SOX6-213ENST00000530378 ZNF136P52737 540 aa9.72□□□□□ -0.85
SOX6-213ENST00000530378 MFAP5Q13361 173 aa9.72□□□□□ -0.85
SOX6-213ENST00000530378 PIN1Q13526 163 aaPredicted RBP9.72□□□□□ -0.85
SOX6-213ENST00000530378 ELOAQ14241 798 aaKnown RBP9.72□□□□□ -0.85
SOX6-213ENST00000530378 TOMM34Q15785 309 aaPredicted RBP9.72□□□□□ -0.85
SOX6-213ENST00000530378 COL28A1Q2UY09 1125 aa9.72□□□□□ -0.85
SOX6-213ENST00000530378 SLC22A10Q63ZE4 541 aa9.72□□□□□ -0.85
SOX6-213ENST00000530378 HMBOX1Q6NT76 420 aa9.72□□□□□ -0.85
SOX6-213ENST00000530378 BORAQ6PGQ7 559 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms