RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PCSK1NQ9UHG2 260 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 TP53TG3Q9ULZ0 132 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 MRPS33Q9Y291 106 aaKnown RBP3.52□□□□□ -1.85
C11orf88-204ENST00000529661 WDR45Q9Y484 360 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 PTCH1Q13635 1447 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 TRAV9-2A0A087WT02 112 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 A0A1W2PNV4 684 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 ZNF840PA6NDX5 716 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 CCT8L1PA6NM43 557 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 MTX2O75431 263 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 HNF1AP20823 631 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 UQCRC2P22695 453 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 RPL8P62917 257 aaKnown RBP3.51□□□□□ -1.85
C11orf88-204ENST00000529661 BDH1Q02338 343 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 PAX2Q02962 417 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 ZFP36L1Q07352 338 aaKnown RBP3.51□□□□□ -1.85
C11orf88-204ENST00000529661 RGS1Q08116 209 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 ZNF154Q13106 437 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 HIGD2BQ4VC39 106 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 CAVIN4Q5BKX8 364 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 OTUD6AQ7L8S5 288 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 TAS2R42Q7RTR8 314 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 LINC00612Q8N6U2 182 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 CNIH3Q8TBE1 160 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 M1APQ8TC57 530 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 ADAMTS16Q8TE57 1224 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 AENQ8WTP8 325 aaKnown RBP3.51□□□□□ -1.85
C11orf88-204ENST00000529661 IL1F10Q8WWZ1 152 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 RPL3LQ92901 407 aaKnown RBP3.51□□□□□ -1.85
C11orf88-204ENST00000529661 MCCC1Q96RQ3 725 aaPredicted RBP3.51□□□□□ -1.85
C11orf88-204ENST00000529661 ZBTB18Q99592 522 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 GCOM2Q9BZD3 368 aaPredicted RBP3.51□□□□□ -1.85
C11orf88-204ENST00000529661 ELOVL3Q9HB03 270 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 TIGARQ9NQ88 270 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 NAALAD2Q9Y3Q0 740 aa3.51□□□□□ -1.85
C11orf88-204ENST00000529661 EIF4G1Q04637 1599 aaKnown RBP3.51□□□□□ -1.85
C11orf88-204ENST00000529661 TTC21BQ7Z4L5 1316 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 A0A087WWV3 80 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 H0Y8G0 127 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 BTN3A3O00478 584 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 ZNF253O75346 499 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 SLC2A10O95528 541 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 UGT2B4P06133 528 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 PGCP20142 388 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 BCL3P20749 454 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 IDSP22304 550 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 ATP5A1P25705 553 aaKnown RBP3.5□□□□□ -1.85
C11orf88-204ENST00000529661 ACVR1BP36896 505 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 ERVPABLB-1P60509 514 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 UBE2HP62256 183 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 EWSR1Q01844 656 aaKnown RBP eCLIP3.5□□□□□ -1.85
C11orf88-204ENST00000529661 PUDPQ08623 228 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 RIPPLY1Q0D2K3 151 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 GGTA1PQ4G0N0 100 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 TEX44Q53QW1 395 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 MEDAGQ5VYS4 303 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 PVRIGQ6DKI7 326 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 FAM71F2Q6NXP2 309 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 ANGPTL8Q6UXH0 198 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 GCNT7Q6ZNI0 430 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 TMEM17Q86X19 198 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 HPS6Q86YV9 775 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 ZNF683Q8IZ20 524 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 SLC38A6Q8IZM9 456 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 ANKFN1Q8N957 763 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 OR9A4Q8NGU2 314 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 FAM3CQ92520 227 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 EMG1Q92979 244 aaKnown RBP3.5□□□□□ -1.85
C11orf88-204ENST00000529661 PPP1R16AQ96I34 528 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 SLC6A7Q99884 636 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 CCDC77Q9BR77 488 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 TM2D1Q9BX74 207 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.5□□□□□ -1.85
C11orf88-204ENST00000529661 DDX18Q9NVP1 670 aaKnown RBP3.5□□□□□ -1.85
C11orf88-204ENST00000529661 HOXC10Q9NYD6 342 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 GNG12Q9UBI6 72 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 RNF14Q9UBS8 474 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 L3MBTL1Q9Y468 752 aa3.5□□□□□ -1.85
C11orf88-204ENST00000529661 FRMPD4Q14CM0 1322 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 OR6C65A6NJZ3 312 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 EFCAB7A8K855 629 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 NPIPA7E9PJI5 369 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 L7N2F9 121 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 PHF1O43189 567 aaPredicted RBP3.49□□□□□ -1.85
C11orf88-204ENST00000529661 SNNO75324 88 aaPredicted RBP3.49□□□□□ -1.85
C11orf88-204ENST00000529661 SURF6O75683 361 aaKnown RBP3.49□□□□□ -1.85
C11orf88-204ENST00000529661 F10P00742 488 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 NPIPA8P0DM63 369 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 TAGLN2P37802 199 aaKnown RBP3.49□□□□□ -1.85
C11orf88-204ENST00000529661 GNPDA1P46926 289 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 RND3P61587 244 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 KCNJ11Q14654 390 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 ZMYND11Q15326 602 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 CFAP221Q4G0U5 840 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 TTC23Q5W5X9 447 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 METAP1DQ6UB28 335 aaPredicted RBP3.49□□□□□ -1.85
C11orf88-204ENST00000529661 SERPINA9Q86WD7 417 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 LINC01561Q8N1V8 128 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 FBXL16Q8N461 479 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms