RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 TGM7Q96PF1 710 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 MYCBPQ99417 103 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 NPY6RQ99463 290 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 SOSTQ9BQB4 213 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 NFKBIZQ9BYH8 718 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 PCSK1NQ9UHG2 260 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 CRLS1Q9UJA2 301 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 NPIPA1Q9UND3 350 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 SAMD4AQ9UPU9 718 aaKnown RBP3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 POLDIP2Q9Y2S7 368 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 WDR45Q9Y484 360 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 CSAG2Q9Y5P2 127 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 CFAP65Q6ZU64 1925 aaKnown RBP3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 USP6P35125 1406 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 TRAV26-1A0A087WT03 109 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 FRG2CA6NGY1 282 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 LCMT2O60294 686 aaKnown RBP3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 CA1P00915 261 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 ZNF44P15621 663 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 GATA1P15976 413 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 GCFC2P16383 781 aaKnown RBP3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 CYP2B6P20813 491 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 SHC1P29353 583 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 BDH1Q02338 343 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 RIPK1Q13546 671 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 NLRP9Q7RTR0 991 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 KIAA1328Q86T90 577 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 C17orf82Q86X59 251 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 GPR137CQ8N3F9 429 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 OR8J1Q8NGP2 316 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 ZNF671Q8TAW3 534 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 TRMT10AQ8TBZ6 339 aaKnown RBP3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 C7orf34Q96L11 122 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 MTMR9Q96QG7 549 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 MCCC1Q96RQ3 725 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 MCHR1Q99705 422 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 PPDPFQ9H3Y8 114 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 B3GNT2Q9NY97 397 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 SPRR3Q9UBC9 169 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 SLC2A6Q9UGQ3 507 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 RIMS3Q9UJD0 308 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 ANGPTL2Q9UKU9 493 aa3.55□□□□□ -1.84
HMGB1P1-201ENST00000522557 KIF16BQ96L93 1317 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 TRAV9-2A0A087WT02 112 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 TRABD2BA6NFA1 517 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 G3V4G9 280 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 PHF1O43189 567 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 ZNF264O43296 627 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 PRKAB2O43741 272 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 NUDT21O43809 227 aaKnown RBP3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 SH3BGRLO75368 114 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 H2AFZP0C0S5 128 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 PCMT1P22061 227 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 GATA2P23769 480 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 ATP5A1P25705 553 aaKnown RBP3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 GRIA1P42261 906 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 AP3M2P53677 418 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 RPS14P62263 151 aaKnown RBP3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 PAX2Q02962 417 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 ZFP36L1Q07352 338 aaKnown RBP3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 RGS1Q08116 209 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 ST3GAL3Q11203 375 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 EXOC3L2Q2M3D2 409 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 TCTEX1D4Q5JR98 221 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 C10orf120Q5SQS8 335 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 ATF7IP2Q5U623 682 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 CGB2Q6NT52 195 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 FAM199XQ6PEV8 388 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 LRRC70Q7Z2Q7 622 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 SLC25A42Q86VD7 318 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 HIPK1Q86Z02 1210 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 VSTM4Q8IW00 320 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 GPR65Q8IYL9 337 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 OR10A7Q8NGE5 316 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 CNIH3Q8TBE1 160 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 AENQ8WTP8 325 aaKnown RBP3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 GTSF1Q8WW33 167 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 CTNNBL1Q8WYA6 563 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 PSMB7Q99436 277 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 ZNF670Q9BS34 389 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 NIPSNAP3BQ9BS92 247 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 PARD6BQ9BYG5 372 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 PUS3Q9BZE2 481 aaKnown RBP3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 LRRC40Q9H9A6 602 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 COX16Q9P0S2 106 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 PRODH2Q9UF12 536 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 MOB4Q9Y3A3 225 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 ATP10AO60312 1499 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 MRC2Q9UBG0 1479 aa3.54□□□□□ -1.84
HMGB1P1-201ENST00000522557 LOC100131303A0A0U1RQF7 123 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 A0A0U1RQS6 177 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 METTL21EPA6NDL7 271 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 ZNF705EA8MWA4 302 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 G3V3Y1 287 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 NBR2O15453 112 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 LRRTM2O43300 516 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 SCRG1O75711 98 aa3.53□□□□□ -1.84
HMGB1P1-201ENST00000522557 IL1BP01584 269 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms