RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 IMP4Q96G21 291 aaKnown RBP11.26□□□□□ -0.61
SPIDR-217ENST00000522117 ZFP3Q96NJ6 502 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 JAM3Q9BX67 310 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 PARD6GQ9BYG4 376 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-217ENST00000522117 TOLLIPQ9H0E2 274 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 WDR13Q9H1Z4 485 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 MRPL15Q9P015 296 aaKnown RBP11.26□□□□□ -0.61
SPIDR-217ENST00000522117 LAMA2P24043 3122 aaKnown RBP11.26□□□□□ -0.61
SPIDR-217ENST00000522117 NUP214P35658 2090 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-217ENST00000522117 FAM221AA4D161 298 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 H7C0S8 307 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 TMEM189-UBE2V1I3L0A0 370 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 YY2O15391 372 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 ACTL6AO96019 429 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 GJB1P08034 283 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 MMP2P08253 660 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 HCKP08631 526 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 GNSP15586 552 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 SDC1P18827 310 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 RPS12P25398 132 aaKnown RBP11.26□□□□□ -0.61
SPIDR-217ENST00000522117 LMO2P25791 158 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 KIR3DL1P43629 444 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 CCR9P51686 369 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 MEF2AQ02078 507 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-217ENST00000522117 DHCR24Q15392 516 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 TMEM31Q5JXX7 168 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 RAB12Q6IQ22 244 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 DEGS2Q6QHC5 323 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 CLECL1Q8IZS7 167 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 OR56B2PQ8NGI1 322 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 OR5M1Q8NGP8 315 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 OR4L1Q8NH43 312 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 ACOT11Q8WXI4 607 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-217ENST00000522117 SLC39A7Q92504 469 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 KCTD12Q96CX2 325 aaKnown RBP11.26□□□□□ -0.61
SPIDR-217ENST00000522117 MRPL37Q9BZE1 423 aaKnown RBP11.26□□□□□ -0.61
SPIDR-217ENST00000522117 TKTL2Q9H0I9 626 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 CCDC86Q9H6F5 360 aaKnown RBP11.26□□□□□ -0.61
SPIDR-217ENST00000522117 TPT1P8Q9HAU6 139 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 OSER1Q9NX31 292 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 TAS2R5Q9NYW4 299 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 TVP23BQ9NYZ1 205 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 SPG21Q9NZD8 308 aa11.26□□□□□ -0.61
SPIDR-217ENST00000522117 SCN1AP35498 2009 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 PCDH7O60245 1069 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 RPP40O75818 363 aaKnown RBP11.25□□□□□ -0.61
SPIDR-217ENST00000522117 UBL3O95164 117 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 CPSF4O95639 269 aaKnown RBP11.25□□□□□ -0.61
SPIDR-217ENST00000522117 ARF4P18085 180 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-217ENST00000522117 CELP19835 753 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 SDHAP31040 664 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 TAGLN2P37802 199 aaKnown RBP11.25□□□□□ -0.61
SPIDR-217ENST00000522117 HCCSP53701 268 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 MBTD1Q05BQ5 628 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 ILF3Q12906 894 aaKnown RBP eCLIP11.25□□□□□ -0.612e-6■■■■□ 21.1
SPIDR-217ENST00000522117 OR52W1Q6IF63 320 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 TMEM71Q6P5X7 295 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 C15orf54Q8N8G6 183 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 ZNF354BQ96LW1 612 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 TWSG1Q9GZX9 223 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 AUNIPQ9H7T9 357 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 HRASLSQ9HDD0 168 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 ACKR4Q9NPB9 350 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 MRPS18AQ9NVS2 196 aaKnown RBP11.25□□□□□ -0.61
SPIDR-217ENST00000522117 DDIT4Q9NX09 232 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 PLXNA1Q9UIW2 1896 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 LRRN3E7EW58 273 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 IMPA2O14732 288 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 KIAA0355O15063 1070 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 CREBL2O60519 120 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-217ENST00000522117 ETFAP13804 333 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 HMGCS2P54868 508 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 OR10A3P58181 314 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 MAXP61244 160 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 SHC2P98077 582 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 SREBF2Q12772 1141 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 BOP1Q14137 746 aaKnown RBP11.25□□□□□ -0.61
SPIDR-217ENST00000522117 SLC25A30Q5SVS4 291 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 PRSS45Q7RTY3 260 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 RASGEF1AQ8N9B8 481 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 TGIF2Q9GZN2 237 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 POLR1EQ9GZS1 481 aaKnown RBP11.25□□□□□ -0.61
SPIDR-217ENST00000522117 OPN3Q9H1Y3 402 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-217ENST00000522117 SEMA6CQ9H3T2 930 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 LRRN3Q9H3W5 708 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 CAPN10Q9HC96 672 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 ASF1BQ9NVP2 202 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 ASB6Q9NWX5 421 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 ELOVL2Q9NXB9 296 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 TP53TG5Q9Y2B4 290 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 PCDHB9Q9Y5E1 797 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 PCDHB11Q9Y5F2 797 aa11.25□□□□□ -0.61
SPIDR-217ENST00000522117 NYNRINQ9P2P1 1898 aaKnown RBP11.24□□□□□ -0.61
SPIDR-217ENST00000522117 TRBV4-1A0A0J9YWV2 114 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 NPIPB9F8W1W9 429 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 AP4M1O00189 453 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 TAPBPO15533 448 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 GSTZ1O43708 216 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-217ENST00000522117 ADAP00813 363 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 PRPS2P11908 318 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms