RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 ZNF234Q14588 700 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 UBE2V2Q15819 145 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 PPP1R3AQ16821 1122 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 KLHL38Q2WGJ6 581 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 SPATS1Q496A3 300 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 LY6G6FQ5SQ64 297 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 C9orf135Q5VTT2 229 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 C1orf189Q5VU69 101 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 PAPD7Q5XG87 772 aaKnown RBP3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 C22orf42Q6IC83 251 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 ENPP6Q6UWR7 440 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 CBLL1Q75N03 491 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 SLC26A9Q7LBE3 791 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 SLC16A14Q7RTX9 510 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 PID1Q7Z2X4 250 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 C1QL4Q86Z23 238 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 PLD3Q8IV08 490 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 SLC35F2Q8IXU6 374 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 LRRC34Q8IZ02 419 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 DCP1BQ8IZD4 617 aaKnown RBP3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 GPC2Q8N158 579 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 C8orf31Q8N9H6 132 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 CYB561A3Q8NBI2 242 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 INO80EQ8NBZ0 244 aaPredicted RBP3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 OR10A7Q8NGE5 316 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 OR52I1Q8NGK6 324 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 OR52E5Q8NH55 327 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 TCP10LQ8TDR4 215 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 NUDCD2Q8WVJ2 157 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 HSD17B8Q92506 261 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 FAM131CQ96AQ9 280 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 NSL1Q96IY1 281 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 PDLIM2Q96JY6 352 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 OPALINQ96PE5 141 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 CSPG4P5Q96PW8 444 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 IL12RB2Q99665 862 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 CTRCQ99895 268 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 MAPKAP1Q9BPZ7 522 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 C7orf50Q9BRJ6 194 aaKnown RBP3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 MED10Q9BTT4 135 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 LRRC1Q9BTT6 524 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 CHID1Q9BWS9 393 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 API5Q9BZZ5 524 aaKnown RBP3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 LAT2Q9GZY6 243 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 SHARPINQ9H0F6 387 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 POPDC2Q9HBU9 364 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 UBE2TQ9NPD8 197 aaPredicted RBP3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 DCAF13Q9NV06 445 aaKnown RBP3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 MRPL39Q9NYK5 338 aaKnown RBP3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 SIGLEC8Q9NYZ4 499 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 IL36RNQ9UBH0 155 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 STK17AQ9UEE5 414 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 C19orf25Q9UFG5 118 aaPredicted RBP3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 DCDC2Q9UHG0 476 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 KCNS2Q9ULS6 477 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 SCML1Q9UN30 329 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 WIPI2Q9Y4P8 454 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 USP47Q96K76 1375 aa3.49□□□□□ -1.85
RNU4-60P-201ENST00000517239 SYNJ2O15056 1496 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 GRIN2DO15399 1336 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 CNTNAP2Q9UHC6 1331 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 A0A0G2JK05 382 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 TRBV4-1A0A0J9YWV2 114 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 A0A1W2PPV9 198 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 SMLR1H3BR10 107 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 CYB561D2O14569 222 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 ZBTB5O15062 677 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 MSH4O15457 936 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 TAPBPO15533 448 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 COCHO43405 550 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 PRKAB2O43741 272 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 FCN3O75636 299 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 TOXO94900 526 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 CLDN14O95500 239 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 ETHE1O95571 254 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 MMP1P03956 469 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 NR3C1P04150 777 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 HOXC6P09630 235 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 PNMA6AP0CW24 399 aaPredicted RBP3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 PMCHP20382 165 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 IFNA8P32881 189 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 SLC26A3P40879 764 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 AVPR1BP47901 424 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 NPBWR2P48146 333 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 CDC34P49427 236 aaPredicted RBP3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 LBX1P52954 281 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 HMGCS2P54868 508 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 BACE1P56817 501 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 OR2B6P58173 313 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 DR1Q01658 176 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 GUCY2DQ02846 1103 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 POU3F1Q03052 451 aaPredicted RBP3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 ZNF91Q05481 1191 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 KLRB1Q12918 225 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 TRAF3Q13114 568 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 CALCOCO2Q13137 446 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 ORC2Q13416 577 aaPredicted RBP3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 TUBA3CQ13748 450 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 INPP5JQ15735 1006 aaPredicted RBP3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 PSG3Q16557 428 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms