RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 TPK1Q9H3S4 243 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 DDX31Q9H8H2 851 aaKnown RBP6.25□□□□□ -1.41
VCAN-207ENST00000507162 GP6Q9HCN6 339 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 DYNLRB1Q9NP97 96 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 CA10Q9NS85 328 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 TAS2R16Q9NYV7 291 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 ZNF69Q9UC07 566 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 PACSIN2Q9UNF0 486 aaPredicted RBP6.25□□□□□ -1.41
VCAN-207ENST00000507162 ARHGAP32A7KAX9 2087 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 GOLGA6L10A6NI86 522 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 VSTM5A8MXK1 200 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 GOLGA6L19H0YKK7 550 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 J3QLI3 93 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 hCG_2039718K7EN88 272 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 PHGDHO43175 533 aaKnown RBP6.24□□□□□ -1.41
VCAN-207ENST00000507162 TTC4O95801 387 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 ANGPTL1O95841 491 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 GPANK1O95872 356 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 ADRA2AP08913 450 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 CCDC175P0C221 793 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 CSNK2A2P19784 350 aaPredicted RBP6.24□□□□□ -1.41
VCAN-207ENST00000507162 PTX3P26022 381 aaPredicted RBP6.24□□□□□ -1.41
VCAN-207ENST00000507162 SHC1P29353 583 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 MANFP55145 182 aaKnown RBP6.24□□□□□ -1.41
VCAN-207ENST00000507162 FOXG1P55316 489 aaPredicted RBP6.24□□□□□ -1.41
VCAN-207ENST00000507162 KRTAP10-3P60369 221 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 C17orf67Q0P5P2 114 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 HLXQ14774 488 aaPredicted RBP6.24□□□□□ -1.41
VCAN-207ENST00000507162 TSNQ15631 228 aaKnown RBP6.24□□□□□ -1.41
VCAN-207ENST00000507162 GABRA6Q16445 453 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 FBXW9Q5XUX1 488 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 SAXO2Q658L1 398 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 OR7E24Q6IFN5 339 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 NPSR1Q6W5P4 371 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 SYT10Q6XYQ8 523 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 SPATA21Q7Z572 469 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 GALNT5Q7Z7M9 940 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 GAS2L3Q86XJ1 694 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 TREML1Q86YW5 311 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 LAS2Q8IYD9 372 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 GTPBP8Q8N3Z3 284 aaPredicted RBP6.24□□□□□ -1.41
VCAN-207ENST00000507162 RNF10Q8N5U6 811 aaKnown RBP6.24□□□□□ -1.41
VCAN-207ENST00000507162 UBL4BQ8N7F7 174 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 OR4F5Q8NH21 305 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 HUS1BQ8NHY5 278 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 SGCDQ92629 289 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 MUS81Q96NY9 551 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 TMEM79Q9BSE2 394 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 RSPO3Q9BXY4 272 aaPredicted RBP6.24□□□□□ -1.41
VCAN-207ENST00000507162 TBL1XR1Q9BZK7 514 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 CNOT10Q9H9A5 744 aaKnown RBP6.24□□□□□ -1.41
VCAN-207ENST00000507162 PLAC1Q9HBJ0 212 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 PFDN4Q9NQP4 134 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 TNFRSF19Q9NS68 423 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 IFNKQ9P0W0 207 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 KLHL9Q9P2J3 617 aa6.24□□□□□ -1.41
VCAN-207ENST00000507162 A0A087WZY1 265 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 A0A1W2PRB8 838 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 FAM181BA6NEQ2 426 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 FOXE1O00358 373 aaPredicted RBP6.23□□□□□ -1.41
VCAN-207ENST00000507162 KLF11O14901 512 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 RGS14O43566 566 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 ATP1B1P05026 303 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 KLK1P06870 262 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 TCN1P20061 433 aaPredicted RBP6.23□□□□□ -1.41
VCAN-207ENST00000507162 SERPINB1P30740 379 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 ZNF41P51814 821 aaPredicted RBP6.23□□□□□ -1.41
VCAN-207ENST00000507162 RAG2P55895 527 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 GPX6P59796 221 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 CDK16Q00536 496 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 EFNB3Q15768 340 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 TBCCQ15814 346 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 ERCC6LQ2NKX8 1250 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 ZNF362Q5T0B9 420 aaPredicted RBP6.23□□□□□ -1.41
VCAN-207ENST00000507162 C4orf22Q6V702 233 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 LRRC70Q7Z2Q7 622 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 TRABD2AQ86V40 505 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 NKAPQ8N5F7 415 aaKnown RBP6.23□□□□□ -1.41
VCAN-207ENST00000507162 GATSQ8NAP1 163 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 KLHL29Q96CT2 875 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 ZNF48Q96MX3 618 aaPredicted RBP6.23□□□□□ -1.41
VCAN-207ENST00000507162 DOK1Q99704 481 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 PSD2Q9BQI7 771 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 BPIFA3Q9BQP9 254 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 GATA5Q9BWX5 397 aaPredicted RBP6.23□□□□□ -1.41
VCAN-207ENST00000507162 ZNF717Q9BY31 904 aaPredicted RBP6.23□□□□□ -1.41
VCAN-207ENST00000507162 RACGAP1Q9H0H5 632 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 FN3KRPQ9HA64 309 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 BCO1Q9HAY6 547 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 TCF7L1Q9HCS4 588 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 SAYSD1Q9NPB0 183 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 MED17Q9NVC6 651 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 ASB6Q9NWX5 421 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 CD274Q9NZQ7 290 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 OPN4Q9UHM6 478 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 PSME2Q9UL46 239 aa6.23□□□□□ -1.41
VCAN-207ENST00000507162 CLPSL1A2RUU4 121 aa6.22□□□□□ -1.41
VCAN-207ENST00000507162 AKR1B15C9JRZ8 316 aaPredicted RBP6.22□□□□□ -1.41
VCAN-207ENST00000507162 BCAS2O75934 225 aaPredicted RBP6.22□□□□□ -1.41
VCAN-207ENST00000507162 SLITRK5O94991 958 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms