RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 TSSK2Q96PF2 358 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 TRAF4Q9BUZ4 470 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 ECHDC1Q9NTX5 307 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 ZNF175Q9Y473 711 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 NCOA3Q9Y6Q9 1424 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 TRBV11-1A0A0K0K1C0 115 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 GLTPD2A6NH11 291 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 G3V4G9 280 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 CLDN5O00501 218 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 CFLARO15519 480 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 B3GAT3O94766 335 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 DEXIO95424 95 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 IGF1P05019 195 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 GPX3P22352 226 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 OTX1P32242 354 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 TNFSF8P32971 234 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 MNDAP41218 407 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 NOVA1P51513 510 aaKnown RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 ERVS71-1P61550 626 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 MYBPHQ13203 477 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 SLC9A3R2Q15599 337 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 PDSS1Q5T2R2 415 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 RTL6Q6ICC9 239 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 PNCKQ6P2M8 343 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 VITQ6UXI7 678 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 Q71RC1 249 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 ABHD13Q7L211 337 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 SLC44A3Q8N4M1 653 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 HGDQ93099 445 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 RNF170Q96K19 258 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 NKX3-1Q99801 234 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 ZNF251Q9BRH9 671 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 LYARQ9NX58 379 aaKnown RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 TCAF1Q9Y4C2 921 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 LOXL2Q9Y4K0 774 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 AFF2P51816 1311 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 A0A1W2PQL4 384 aaPredicted RBP4.68□□□□□ -1.66
NIPBL-204ENST00000504430 ZIC3O60481 467 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 PFKFB2O60825 505 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 KRT16P08779 473 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 KITLGP21583 273 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 CBLP22681 906 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 PITPNAQ00169 270 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 FAM27E3Q08E93 113 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 MESP2Q0VG99 397 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 EZH2Q15910 746 aaKnown RBP4.68□□□□□ -1.66
NIPBL-204ENST00000504430 C2CD6Q53TS8 623 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 ALG10Q5BKT4 473 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 ALG10BQ5I7T1 473 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 REEP3Q6NUK4 255 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 TPRG1Q6ZUI0 275 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 AHSA2Q719I0 299 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 UTS2BQ765I0 119 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 ZNF367Q7RTV3 350 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 TAC4Q86UU9 113 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 SFTPA1Q8IWL2 248 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 OR4K2Q8NGD2 314 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 RNASEH2CQ8TDP1 164 aaKnown RBP4.68□□□□□ -1.66
NIPBL-204ENST00000504430 GPR148Q8TDV2 347 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 BPIFA2Q96DR5 249 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 LMLNQ96KR4 655 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 METTL8Q9H825 291 aaKnown RBP4.68□□□□□ -1.66
NIPBL-204ENST00000504430 C2CD4BA6NLJ0 364 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 CHST1O43916 411 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 OR10H3O60404 316 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 CPDO75976 1380 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 VAPBO95292 243 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 LATS1O95835 1130 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 RNF224P0DH78 156 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 PSMC3P17980 439 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 ITGA9Q13797 1035 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 SAMD4BQ5PRF9 694 aaKnown RBP4.68□□□□□ -1.66
NIPBL-204ENST00000504430 SHC4Q6S5L8 630 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 TMEM64Q6YI46 380 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 ZNF836Q6ZNA1 936 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 TSEN54Q7Z6J9 526 aaKnown RBP4.68□□□□□ -1.66
NIPBL-204ENST00000504430 ZNF843Q8N446 348 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 GBGT1Q8N5D6 347 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 OR6M1Q8NGM8 313 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 ACTRT1Q8TDG2 376 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 GATAD1Q8WUU5 269 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 HAS1Q92839 578 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 NAT6Q93015 286 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 ZNF597Q96LX8 424 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 FBXL2Q9UKC9 423 aa4.68□□□□□ -1.66
NIPBL-204ENST00000504430 WDR27A2RRH5 827 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 OR2M5A3KFT3 312 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 PROB1E7EW31 1015 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 INSIG1O15503 277 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 ENSAO43768 121 aaKnown RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 PCDH7O60245 1069 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 EML2O95834 649 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 ANXA3P12429 323 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 MGMTP16455 207 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 HMOX2P30519 316 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 TGFBR2P37173 567 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 DDOSTP39656 456 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 RIPK4P57078 832 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 CHRNB3Q05901 458 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 SRSF1Q07955 248 aaKnown RBP eCLIP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms