RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 GPC6Q9Y625 555 aaPredicted RBP12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 FREM3P0C091 2139 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 SHISA8B8ZZ34 492 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 B8ZZF3 427 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 H3BNH8 94 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 TFECO14948 347 aaPredicted RBP12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 GSTA4O15217 222 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 SUV39H1O43463 412 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 FRS3O43559 492 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 TRAPPC6AO75865 159 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 PDE5AO76074 875 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 EPPINO95925 133 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 CSTAP01040 98 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 PABPC4LP0CB38 370 aaKnown RBP12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 UBL4AP11441 157 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 ZNF24P17028 368 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 PGM1P36871 562 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 CRYBA2P53672 197 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 EEF1A1P68104 462 aaKnown RBP12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 HSF1Q00613 529 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 EIPR1Q53HC9 387 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 MRPL2Q5T653 305 aaKnown RBP12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 PRAMEF8Q5VWM4 474 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 PRAMEF7Q5VXH5 474 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 ERICH5Q6P6B1 374 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 YRDCQ86U90 279 aaKnown RBP12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 TMCO5AQ8N6Q1 288 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 FADS6Q8N9I5 356 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 OR5M1Q8NGP8 315 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 OR10Q1Q8NGQ4 319 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 B4GALNT2Q8NHY0 566 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 FIG4Q92562 907 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 TAMM41Q96BW9 452 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 NPAS1Q99742 590 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 THTPAQ9BU02 230 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 SLC6A15Q9H2J7 730 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 ZNF703Q9H7S9 590 aaPredicted RBP12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 NDE1Q9NXR1 346 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 CD300AQ9UGN4 299 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 AP3M1Q9Y2T2 418 aa12.07□□□□□ -0.48
PDLIM7-212ENST00000504380 UNC79Q9P2D8 2635 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 CXCR6O00574 342 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 AP3D1O14617 1153 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 GYG2O15488 501 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 ZNF264O43296 627 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 DNAJA2O60884 412 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 ADAM11O75078 769 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 MFN2O95140 757 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 WISP1O95388 367 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 CRYABP02511 175 aaKnown RBP12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 GKN3PP0CG01 181 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 NID1P14543 1247 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 ETS2P15036 469 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 RYKP34925 604 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 CCR4P51679 360 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 HOXC5Q00444 222 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 SRSF1Q07955 248 aaKnown RBP eCLIP12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 LARS2Q15031 903 aaKnown RBP12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 TOMM34Q15785 309 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 INAQ16352 499 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 LIN52Q52LA3 116 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 LRRC23Q53EV4 343 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 CMPK2Q5EBM0 449 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 WIPI1Q5MNZ9 446 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 SAMD4BQ5PRF9 694 aaKnown RBP12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 ZNF324BQ6AW86 544 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 ARSKQ6UWY0 536 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 CCDC80Q76M96 950 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 EIF3MQ7L2H7 374 aaKnown RBP12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 PRICKLE2Q7Z3G6 844 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 SLC22A16Q86VW1 577 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 KRT73Q86Y46 540 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 ARMC8Q8IUR7 673 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 SIAH3Q8IW03 269 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 GPR32P1Q8NGA4 272 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 CPT1CQ8TCG5 803 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 FAR1Q8WVX9 515 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 ZNF607Q96SK3 696 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 WFDC6Q9BQY6 131 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 LAT2Q9GZY6 243 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 PCDHAC1Q9H158 963 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 CACYBPQ9HB71 228 aaKnown RBP12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 OLAHQ9NV23 265 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 DNAJB12Q9NXW2 375 aaKnown RBP12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 SEC14L3Q9UDX4 400 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 ZNF232Q9UNY5 417 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 RPH3AQ9Y2J0 694 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 IFT52Q9Y366 437 aa12.06□□□□□ -0.48
PDLIM7-212ENST00000504380 HEATR5AQ86XA9 2040 aa12.05□□□□□ -0.48
PDLIM7-212ENST00000504380 IGLV3-32A0A0A0MS00 114 aa12.05□□□□□ -0.48
PDLIM7-212ENST00000504380 ACOT7O00154 380 aa12.05□□□□□ -0.48
PDLIM7-212ENST00000504380 EBAG9O00559 213 aa12.05□□□□□ -0.48
PDLIM7-212ENST00000504380 CBR3O75828 277 aa12.05□□□□□ -0.48
PDLIM7-212ENST00000504380 NUDT14O95848 222 aa12.05□□□□□ -0.48
PDLIM7-212ENST00000504380 THBS1P07996 1170 aa12.05□□□□□ -0.48
PDLIM7-212ENST00000504380 PRG2P13727 222 aa12.05□□□□□ -0.48
PDLIM7-212ENST00000504380 HK1P19367 917 aa12.05□□□□□ -0.48
PDLIM7-212ENST00000504380 TNFRSF1BP20333 461 aa12.05□□□□□ -0.48
PDLIM7-212ENST00000504380 CD247P20963 164 aa12.05□□□□□ -0.48
PDLIM7-212ENST00000504380 ELAVL4P26378 380 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms