RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 ANGPTL3Q9Y5C1 460 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 YLPM1P49750 1951 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 LOC105371242A0A075B767 164 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 SHISA3A0PJX4 238 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 GXYLT2A0PJZ3 443 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 OR6C70A6NIJ9 312 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 NUDT19A8MXV4 375 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 VWC2LB2RUY7 222 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 LYNX1G3V0Z9 82 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 K7EPI3 171 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 ACOX3O15254 700 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 TMCC2O75069 709 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 CDH16O75309 829 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 SKAP2O75563 359 aaPredicted RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 ESRRBO95718 433 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 IL33O95760 270 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 TTC4O95801 387 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 BPNT1O95861 308 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 IGKV1D-16P01601 117 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 CT45A8P0DMV1 189 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 CT45A9P0DMV2 189 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 LYNX1P0DP58 116 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 MLNP12872 115 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 CD1DP15813 335 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 PORP16435 677 aaPredicted RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 TSPAN8P19075 237 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 IGHV1-2P23083 117 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 TTKP33981 857 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 DEKP35659 375 aaKnown RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 CASP2P42575 452 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 EFNA4P52798 201 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 MAPK12P53778 367 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 SLC12A2P55011 1212 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 EEFSECP57772 596 aaKnown RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 DSCR9P59020 149 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 EEF1A1P68104 462 aaKnown RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 PHEXP78562 749 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 LGALS3BPQ08380 585 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 EFR3AQ14156 821 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 FGFBP1Q14512 234 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 ERCC6LQ2NKX8 1250 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 GRAMD1BQ3KR37 738 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 CT45A2Q5DJT8 189 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 ZNF628Q5EBL2 1059 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 TCHHL1Q5QJ38 904 aaPredicted RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 TMEM201Q5SNT2 666 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 CCNYL2Q5T2Q4 361 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 EEF1A1P5Q5VTE0 462 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 SULT1C3Q6IMI6 304 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 SLC48A1Q6P1K1 146 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 TMEM81Q6P7N7 255 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 DRICH1Q6PGQ1 229 aaPredicted RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 SHQ1Q6PI26 577 aaKnown RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 TMEM107Q6UX40 140 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 APOOLQ6UXV4 268 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 SLC46A3Q7Z3Q1 461 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 SZRD1Q7Z422 152 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 COMMD6Q7Z4G1 85 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 GOLGA7Q7Z5G4 137 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 SPATA19Q7Z5L4 167 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 PEG10Q86TG7 708 aaKnown RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 TMEM139Q8IV31 216 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 PPIL6Q8IXY8 311 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 ZCCHC24Q8N2G6 241 aaKnown RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 TCAIMQ8N3R3 496 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 SPC24Q8NBT2 197 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 MCUQ8NE86 351 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 C17orf47Q8NEP4 570 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 OR7G2Q8NG99 324 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 OR7G1Q8NGA0 311 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 SGMS2Q8NHU3 365 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 UHMK1Q8TAS1 419 aaKnown RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 RNF128Q8TEB7 428 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 DUSP19Q8WTR2 217 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 WDR34Q96EX3 536 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 CNRIP1Q96F85 164 aaPredicted RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 ADGRG7Q96K78 797 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 KLHL15Q96M94 604 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 VSTM2LQ96N03 204 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 BAG1Q99933 345 aaPredicted RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 PKP2Q99959 881 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 DHRS9Q9BPW9 319 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 TBL1XR1Q9BZK7 514 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 CD244Q9BZW8 370 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 DERL2Q9GZP9 239 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 TPK1Q9H3S4 243 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 TSPY26PQ9H489 355 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 CXorf36Q9H7Y0 433 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 COQ10BQ9H8M1 238 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 CNOT10Q9H9A5 744 aaKnown RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 ESM1Q9NQ30 184 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 LZTFL1Q9NQ48 299 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 PLSCR4Q9NRQ2 329 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 FARSBQ9NSD9 589 aaKnown RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 MS4A12Q9NXJ0 267 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 NUDT4Q9NZJ9 180 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 SENP1Q9P0U3 644 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 CPSF2Q9P2I0 782 aaKnown RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 KLHL13Q9P2N7 655 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 PRODH2Q9UF12 536 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms