RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ZNF782Q6ZMW2 699 aaPredicted RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 C15orf39Q6ZRI6 1047 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 QSOX2Q6ZRP7 698 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 MED25Q71SY5 747 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TRABD2AQ86V40 505 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC22A16Q86VW1 577 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 WDFY1Q8IWB7 410 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 DNAJC22Q8N4W6 341 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ATPAF2Q8N5M1 289 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF557Q8N988 423 aaPredicted RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 CLEC1AQ8NC01 280 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 DMBX1Q8NFW5 382 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 OR5T3Q8NGG3 340 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RHEBL1Q8TAI7 183 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 HMGB4Q8WW32 186 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TCTEX1D2Q8WW35 142 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 DNAJB3Q8WWF6 145 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SMPDL3BQ92485 455 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 C12orf43Q96C57 262 aaKnown RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ISOC1Q96CN7 298 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RAX2Q96IS3 184 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RNF170Q96K19 258 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SFXN2Q96NB2 322 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 PRAP1Q96NZ9 151 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 STACQ99469 402 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 DOK1Q99704 481 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ZSWIM1Q9BR11 485 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 WDR83Q9BRX9 315 aaKnown RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 NICN1Q9BSH3 213 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TRMT61BQ9BVS5 477 aaKnown RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ELOVL1Q9BW60 279 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 EGLN1Q9GZT9 426 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 COMMD4Q9H0A8 199 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SEMA6AQ9H2E6 1030 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TMPRSS5Q9H3S3 457 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SMOC2Q9H3U7 446 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM38AQ9H6F2 299 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 REEP4Q9H6H4 257 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 EFCAB1Q9HAE3 211 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 MEAF6Q9HAF1 191 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 C6orf50Q9HD87 102 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 OR2S2Q9NQN1 319 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 DNMT3BQ9UBC3 853 aaKnown RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 GHRLQ9UBU3 117 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 FBXL17Q9UF56 701 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 STUB1Q9UNE7 303 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RASD1Q9Y272 281 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 HEMK1Q9Y5R4 338 aaPredicted RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ADGRL2O95490 1459 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 CCDC18Q5T9S5 1454 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 MYH7P12883 1935 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 REREQ9P2R6 1566 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM2Q9UHN6 1383 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 PLCH2O75038 1416 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ZFYVE9O95405 1425 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ARHGAP35Q9NRY4 1499 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TRBV7-9A0A0J9YWB2 115 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 NEMP2A6NFY4 417 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ANXA2P2A6NMY6 339 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 E5RJQ4 531 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 H3BN98 237 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 MKRN2OSH3BPM6 223 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 BTN3A3O00478 584 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 GOSR2O14653 212 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ANKRD28O15084 1053 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 CLIC2O15247 247 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SNAI2O43623 268 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 FKBP6O75344 327 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RAD17O75943 681 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 NDUFA10O95299 355 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 IFNA5P01569 189 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 FGGP02679 453 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SLPIP03973 132 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TCRBP04435 133 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ALPIP09923 528 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 C8orf89P0DMQ9 161 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RRASP10301 218 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 GABRB1P18505 474 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 NPR2P20594 1047 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TGM2P21980 687 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC6A2P23975 617 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 PSMB5P28074 263 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC6A1P30531 599 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 S100A7P31151 101 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 PTPN7P35236 360 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RBM34P42696 430 aaKnown RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 BRCC3P46736 316 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RAB28P51157 221 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 DNAJB13P59910 316 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 UFM1P61960 85 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RPL19P84098 196 aaKnown RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ZXDAP98168 799 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TFAMQ00059 246 aaKnown RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SEMA3BQ13214 749 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 CTBP1Q13363 440 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 GRAPQ13588 217 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 NDUFA9Q16795 377 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC9C1Q4G0N8 1177 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM41BQ5BJD5 291 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms