RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 CXCL6P80162 114 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 PDZK1IP1Q13113 114 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 CHI3L2Q15782 390 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 MAPK6Q16659 721 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 CDKN3Q16667 212 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 HSP90AA5PQ58FG0 334 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 MEDAGQ5VYS4 303 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 RNLSQ5VYX0 342 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 ASPHD2Q6ICH7 369 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 SCYL2Q6P3W7 929 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 ARSKQ6UWY0 536 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 LANCL3Q6ZV70 420 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 ERC1Q8IUD2 1116 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 ZPLD1Q8TCW7 415 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 GTSF1Q8WW33 167 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 OR5M11Q96RB7 305 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 TESK2Q96S53 571 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 TMEM121Q9BTD3 319 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 TSSK1BQ9BXA7 367 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 DHX33Q9H6R0 707 aaKnown RBP3.35□□□□□ -1.87
SMC4-224ENST00000494612 LPAR2Q9HBW0 351 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 RDH8Q9NYR8 311 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 RREB1Q92766 1687 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 GRIN2DO15399 1336 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 FMN2Q9NZ56 1722 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 ARHGEF10O15013 1369 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 COL14A1Q05707 1796 aaKnown RBP3.35□□□□□ -1.87
SMC4-224ENST00000494612 NRKQ7Z2Y5 1582 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 THSD7AQ9UPZ6 1657 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 IFT172Q9UG01 1749 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 RGPD8O14715 1765 aaPredicted RBP3.34□□□□□ -1.87
SMC4-224ENST00000494612 XRCC1P18887 633 aaPredicted RBP3.34□□□□□ -1.87
SMC4-224ENST00000494612 KLK2P20151 261 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 DPP4P27487 766 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 GDF1P27539 372 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 CALRP27797 417 aaKnown RBP3.34□□□□□ -1.87
SMC4-224ENST00000494612 AXLP30530 894 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 HPDP32754 393 aaPredicted RBP3.34□□□□□ -1.87
SMC4-224ENST00000494612 ALDH3B2P48448 385 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 SLC25A1P53007 311 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 NAPAP54920 295 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 SCGB2A2Q13296 93 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 ASAH1Q13510 395 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 TGIF1Q15583 401 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 GSG1Q2KHT4 349 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 LGSNQ5TDP6 509 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
SMC4-224ENST00000494612 OR2T33Q8NG76 320 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 CCDC26Q8TAB7 109 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 ADAMTS16Q8TE57 1224 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 PINX1Q96BK5 328 aaKnown RBP3.34□□□□□ -1.87
SMC4-224ENST00000494612 VPS35Q96QK1 796 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 THUMPD2Q9BTF0 503 aaKnown RBP3.34□□□□□ -1.87
SMC4-224ENST00000494612 FICDQ9BVA6 458 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 AGPAT5Q9NUQ2 364 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 Q9UF83 564 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 VSIG4Q9Y279 399 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 MFHAS1Q9Y4C4 1052 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 AP4B1Q9Y6B7 739 aa3.34□□□□□ -1.87
SMC4-224ENST00000494612 SBNO1A3KN83 1393 aa3.34□□□□□ -1.88
SMC4-224ENST00000494612 CHD4Q14839 1912 aa3.34□□□□□ -1.88
SMC4-224ENST00000494612 MYOM1P52179 1685 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 PPLO60437 1756 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 HCFC1P51610 2035 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 IGLV3-10A0A075B6K4 115 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 A0A1B0GUL7 405 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 CALCBP10092 127 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 THRBP10828 461 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 TNNI3P19429 210 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 FASP25445 335 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 CDH5P33151 784 aaPredicted RBP3.33□□□□□ -1.88
SMC4-224ENST00000494612 RPL4P36578 427 aaKnown RBP3.33□□□□□ -1.88
SMC4-224ENST00000494612 MDH2P40926 338 aaKnown RBP3.33□□□□□ -1.88
SMC4-224ENST00000494612 RPS8P62241 208 aaKnown RBP3.33□□□□□ -1.88
SMC4-224ENST00000494612 CAMK4Q16566 473 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 CGB2Q6NT52 195 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 AFTPHQ6ULP2 937 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 MARCH9Q86YJ5 346 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 CBWD2Q8IUF1 395 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 ZBED8Q8IZ13 594 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 BPIFB2Q8N4F0 458 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 LINC00612Q8N6U2 182 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 M1APQ8TC57 530 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 TFB1MQ8WVM0 346 aaKnown RBP3.33□□□□□ -1.88
SMC4-224ENST00000494612 SERAC1Q96JX3 654 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 CASD1Q96PB1 797 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 ZNF416Q9BWM5 594 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 ELOVL4Q9GZR5 314 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 COMMD4Q9H0A8 199 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 POLR3FQ9H1D9 316 aaPredicted RBP3.33□□□□□ -1.88
SMC4-224ENST00000494612 SLC25A51Q9H1U9 297 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 IKZF5Q9H5V7 419 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 CALHM2Q9HA72 323 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 POLE3Q9NRF9 147 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 CCDC7Q96M83 1385 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 USP6P35125 1406 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 RRBP1Q9P2E9 1410 aaKnown RBP3.33□□□□□ -1.88
SMC4-224ENST00000494612 KNDC1Q76NI1 1749 aa3.33□□□□□ -1.88
SMC4-224ENST00000494612 UTRNP46939 3433 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 SAGE2PA6NJ88 616 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms