RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 SMNDC1O75940 238 aaKnown RBP eCLIP7.82□□□□□ -1.165e-10■■■□□ 14.8
GABRE-211ENST00000491339 SYNGR4O95473 234 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 PLGP00747 810 aaPredicted RBP7.82□□□□□ -1.16
GABRE-211ENST00000491339 VIMP08670 466 aaKnown RBP7.82□□□□□ -1.16
GABRE-211ENST00000491339 ELK4P28324 431 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 EIF1P41567 113 aaKnown RBP7.82□□□□□ -1.16
GABRE-211ENST00000491339 ANXA11P50995 505 aaKnown RBP7.82□□□□□ -1.16
GABRE-211ENST00000491339 PON3Q15166 354 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 EXOSC6Q5RKV6 272 aaKnown RBP7.82□□□□□ -1.16
GABRE-211ENST00000491339 ATAD3BQ5T9A4 648 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 OR4F3Q6IEY1 312 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 C16orf62Q7Z3J2 963 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 GTPBP8Q8N3Z3 284 aaPredicted RBP7.82□□□□□ -1.16
GABRE-211ENST00000491339 METTL25Q8N6Q8 603 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 OR8J2Q8NGG1 315 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 OR5M1Q8NGP8 315 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 PHOSPHO1Q8TCT1 267 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 TESCQ96BS2 214 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 OR7D2Q96RA2 312 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 ZBTB18Q99592 522 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 RTN4RQ9BZR6 473 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 CLEC4MQ9H2X3 399 aaPredicted RBP7.82□□□□□ -1.16
GABRE-211ENST00000491339 MEAF6Q9HAF1 191 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 EXD2Q9NVH0 621 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 GALNT8Q9NY28 637 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 ZNF337Q9Y3M9 751 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 CSMD1Q96PZ7 3565 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 GJE1A6NN92 205 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 A6NNC1 897 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 B4DXG7 233 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 E9PBE3 544 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 GTPBP1O00178 669 aaKnown RBP7.82□□□□□ -1.16
GABRE-211ENST00000491339 EDF1O60869 148 aaKnown RBP7.82□□□□□ -1.16
GABRE-211ENST00000491339 KITP10721 976 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 LSP1P33241 339 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 EIF1AXP47813 144 aaKnown RBP7.82□□□□□ -1.16
GABRE-211ENST00000491339 KHKP50053 298 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 KRTAP10-9P60411 292 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 HBA1P69905 142 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 SIRPAP78324 504 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 LRRC74AQ0VAA2 488 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 FOXF2Q12947 444 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 PLPPR5Q32ZL2 321 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 OGFOD2Q6N063 350 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 POMZP3Q6PJE2 187 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 APOOLQ6UXV4 268 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 TRIML2Q8N7C3 387 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 OR4C3Q8NH37 302 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 ZNF845Q96IR2 970 aaPredicted RBP7.82□□□□□ -1.16
GABRE-211ENST00000491339 GPATCH1Q9BRR8 931 aaKnown RBP7.82□□□□□ -1.16
GABRE-211ENST00000491339 FANCFQ9NPI8 374 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 MED17Q9NVC6 651 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 GPATCH2Q9NW75 528 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 JKAMPQ9P055 326 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 MARCOQ9UEW3 520 aaPredicted RBP7.82□□□□□ -1.16
GABRE-211ENST00000491339 EMC9Q9Y3B6 208 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 OTOGQ6ZRI0 2925 aa7.82□□□□□ -1.16
GABRE-211ENST00000491339 POLQO75417 2590 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 MSTNO14793 375 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 HDAC3O15379 428 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 TGM6O95932 706 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 UBL4AP11441 157 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 MATN1P21941 496 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 CHI3L1P36222 383 aaPredicted RBP7.81□□□□□ -1.16
GABRE-211ENST00000491339 P2RX1P51575 399 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 CCR4P51679 360 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 ATP12AP54707 1039 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 CLDN15P56746 228 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 GNGT1P63211 74 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 ZNF117Q03924 483 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 SNTB1Q13884 538 aaKnown RBP7.81□□□□□ -1.16
GABRE-211ENST00000491339 ESPNLQ6ZVH7 1005 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 SPATA19Q7Z5L4 167 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 ZAR1Q86SH2 424 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 CLECL1Q8IZS7 167 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 TOR1AIP2Q8NFQ8 470 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 OR5D16Q8NGK9 328 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 NINJ1Q92982 152 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 REXO5Q96IC2 774 aaKnown RBP7.81□□□□□ -1.16
GABRE-211ENST00000491339 RNF145Q96MT1 663 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 SIKE1Q9BRV8 207 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 PNPOQ9NVS9 261 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 NDRG3Q9UGV2 375 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 PROCRQ9UNN8 238 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 CSMD2Q7Z408 3487 aa7.81□□□□□ -1.16
GABRE-211ENST00000491339 SH3D21A4FU49 640 aa7.8□□□□□ -1.16
GABRE-211ENST00000491339 SHISA8B8ZZ34 492 aa7.8□□□□□ -1.16
GABRE-211ENST00000491339 STX11O75558 287 aa7.8□□□□□ -1.16
GABRE-211ENST00000491339 CTAG2O75638 210 aa7.8□□□□□ -1.16
GABRE-211ENST00000491339 TGDSO95455 350 aa7.8□□□□□ -1.16
GABRE-211ENST00000491339 CPSF4O95639 269 aaKnown RBP7.8□□□□□ -1.16
GABRE-211ENST00000491339 TROVE2P10155 538 aaKnown RBP eCLIP7.8□□□□□ -1.16
GABRE-211ENST00000491339 EPXP11678 715 aa7.8□□□□□ -1.16
GABRE-211ENST00000491339 CD1EP15812 388 aa7.8□□□□□ -1.16
GABRE-211ENST00000491339 UQCRC2P22695 453 aa7.8□□□□□ -1.16
GABRE-211ENST00000491339 S100A3P33764 101 aa7.8□□□□□ -1.16
GABRE-211ENST00000491339 KCNJ5P48544 419 aa7.8□□□□□ -1.16
GABRE-211ENST00000491339 CTBP2P56545 445 aa7.8□□□□□ -1.16
GABRE-211ENST00000491339 CLDN20P56880 219 aa7.8□□□□□ -1.16
GABRE-211ENST00000491339 RPS26P62854 115 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms