RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 NTMQ9P121 344 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 FBXL2Q9UKC9 423 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 ARID1AO14497 2285 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 KIAA1549Q9HCM3 1950 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 ABCA2Q9BZC7 2435 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 A0A1W2PNV4 684 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 GXYLT2A0PJZ3 443 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 CCT8L1PA6NM43 557 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 KDM4EB2RXH2 506 aaPredicted RBP9.35□□□□□ -0.91
TTC28-207ENST00000490475 UBDO15205 165 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 ZIC3O60481 467 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 CPSF4O95639 269 aaKnown RBP9.35□□□□□ -0.91
TTC28-207ENST00000490475 IL33O95760 270 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 HRGP04196 525 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 HK1P19367 917 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 FPR1P21462 350 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 CD79BP40259 229 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 CCT3P49368 545 aaKnown RBP9.35□□□□□ -0.91
TTC28-207ENST00000490475 SEC24CP53992 1094 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 GAS1P54826 345 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 HBA1P69905 142 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 ADAM8P78325 824 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 FOXF2Q12947 444 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 FOXD4Q12950 439 aaPredicted RBP9.35□□□□□ -0.91
TTC28-207ENST00000490475 SPANXN4Q5MJ08 99 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 ANKRD46Q86W74 232 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 GCNT2Q8N0V5 402 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 LRRC75A-AS1Q8N1F1 130 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 NATD1Q8N6N6 113 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 SLC16A11Q8NCK7 471 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 OR8J2Q8NGG1 315 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 FBXO30Q8TB52 745 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 GPR151Q8TDV0 419 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 PIK3R3Q92569 461 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 SLC9A6Q92581 669 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 EFHD2Q96C19 240 aaPredicted RBP9.35□□□□□ -0.91
TTC28-207ENST00000490475 OTUB1Q96FW1 271 aaPredicted RBP9.35□□□□□ -0.91
TTC28-207ENST00000490475 ANKRD27Q96NW4 1050 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 MYCBPQ99417 103 aaPredicted RBP9.35□□□□□ -0.91
TTC28-207ENST00000490475 LMF2Q9BU23 707 aaKnown RBP9.35□□□□□ -0.91
TTC28-207ENST00000490475 TBL1XR1Q9BZK7 514 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 LIME1Q9H400 295 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 ZCCHC3Q9NUD5 404 aaKnown RBP9.35□□□□□ -0.91
TTC28-207ENST00000490475 AP4B1Q9Y6B7 739 aa9.35□□□□□ -0.91
TTC28-207ENST00000490475 HRNRQ86YZ3 2850 aaPredicted RBP9.35□□□□□ -0.91
TTC28-207ENST00000490475 A0A087WZY1 265 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 PRSS51A0A1B0GVH4 220 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 SCO2O43819 266 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 MGRN1O60291 552 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 FADS1O60427 444 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 TMCC2O75069 709 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 SLC22A3O75751 556 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 TNFSF13O75888 250 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 SMNDC1O75940 238 aaKnown RBP eCLIP9.34□□□□□ -0.91
TTC28-207ENST00000490475 TGDSO95455 350 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 IGKV1D-16P01601 117 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 HMGN2P05204 90 aaKnown RBP9.34□□□□□ -0.91
TTC28-207ENST00000490475 CD8BP10966 210 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 ACP2P11117 423 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 IDO1P14902 403 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 PPP3CBP16298 524 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 ZNF17P17021 662 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 S100A3P33764 101 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 CPOXP36551 454 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 MAP3K8P41279 467 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 RFX3P48380 749 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 STARP49675 285 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 CLNS1AP54105 237 aaKnown RBP9.34□□□□□ -0.91
TTC28-207ENST00000490475 PRR5P85299 388 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 TP53BP2Q13625 1128 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 SNCBQ16143 134 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 FAM174BQ3ZCQ3 159 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 SPDYE7PQ495Y7 208 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 OR5M10Q6IEU7 315 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 MFSD12Q6NUT3 480 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 ZCCHC12Q6PEW1 402 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 GALNT10Q86SR1 603 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 MISPQ8IVT2 679 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 CNEP1R1Q8N9A8 125 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 CDRT4Q8N9R6 151 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 OR2M3Q8NG83 312 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 OR4A15Q8NGL6 344 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 OR5AK3PQ8NH89 298 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 PSMA8Q8TAA3 256 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 HOXB13Q92826 284 aaPredicted RBP9.34□□□□□ -0.91
TTC28-207ENST00000490475 TESCQ96BS2 214 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 C1GALT1C1Q96EU7 318 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 POM121Q96HA1 1249 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 ZNF845Q96IR2 970 aaPredicted RBP9.34□□□□□ -0.91
TTC28-207ENST00000490475 MED18Q9BUE0 208 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 G6PC3Q9BUM1 346 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 DSN1Q9H410 356 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 TCF7L2Q9NQB0 619 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 GLRX2Q9NS18 164 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 FBXO34Q9NWN3 711 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 FLRT3Q9NZU0 649 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 RPH3AQ9Y2J0 694 aaPredicted RBP9.34□□□□□ -0.91
TTC28-207ENST00000490475 TESMINQ9Y4I5 508 aa9.34□□□□□ -0.91
TTC28-207ENST00000490475 KCNE3Q9Y6H6 103 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms