RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 OR52R1Q8NGF1 315 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 OR52E1Q8NGJ3 308 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 KLF16Q9BXK1 252 aaPredicted RBP16.55■□□□□ 0.24
NPHP4-209ENST00000489180 ACTR10Q9NZ32 417 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 WASH4PA8MWX3 477 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 SEMA4FO95754 770 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 SUOXP51687 545 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 RAB41Q5JT25 222 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 OR2T11Q8NH01 316 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 AP1S3Q96PC3 154 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 LRFN1Q9P244 771 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 NAV1Q8NEY1 1877 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 POLR1CO15160 346 aaPredicted RBP16.55■□□□□ 0.24
NPHP4-209ENST00000489180 P2RY2P41231 377 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 HBA1P69905 142 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 AKR1C8PQ5T2L2 129 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 RCBTB1Q8NDN9 531 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 ADAMTS16Q8TE57 1224 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 ABHD5Q8WTS1 349 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 GAB3Q8WWW8 586 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 OR7D2Q96RA2 312 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 LRRC37A3O60309 1634 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 TRBV4-1A0A0J9YWV2 114 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 SERPINA5P05154 406 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 ARSBP15848 533 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 OTX2P32243 289 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 RAB4BP61018 213 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 ZNF534Q76KX8 674 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 OR14L1PQ8NHC6 308 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 ARL11Q969Q4 196 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 RRNAD1Q96FB5 475 aaKnown RBP16.55■□□□□ 0.24
NPHP4-209ENST00000489180 OR5B2Q96R09 309 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 VSX1Q9NZR4 365 aaPredicted RBP16.55■□□□□ 0.24
NPHP4-209ENST00000489180 B4GALT7Q9UBV7 327 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 ACOT7O00154 380 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 HLA-DMAP28067 261 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 LCN10Q6JVE6 187 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 CD163Q86VB7 1156 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 METTL4Q8N3J2 472 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 MUL1Q969V5 352 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 C1QTNF2Q9BXJ5 285 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 RANGRFQ9HD47 186 aaPredicted RBP16.54■□□□□ 0.24
NPHP4-209ENST00000489180 RARRES3Q9UL19 164 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 ATXN1LP0C7T5 689 aaKnown RBP16.54■□□□□ 0.24
NPHP4-209ENST00000489180 ITGB8P26012 769 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 ADRA1AP35348 466 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 DAPP51397 102 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 FRMPD2BQ6IN97 320 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 DPPA4Q7L190 304 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 PARS2Q7L3T8 475 aaKnown RBP16.54■□□□□ 0.24
NPHP4-209ENST00000489180 IL17RDQ8NFM7 739 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 OR7G2Q8NG99 324 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 ZNF417Q8TAU3 575 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 ADAMTS18Q8TE60 1221 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 STRADBQ9C0K7 418 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 NXF5Q9H1B4 397 aaKnown RBP16.54■□□□□ 0.24
NPHP4-209ENST00000489180 NOX3Q9HBY0 568 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 TAS2R16Q9NYV7 291 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 AP1M2Q9Y6Q5 423 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 GASTP01350 101 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 LCATP04180 440 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 OR7A5Q15622 319 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 SLC5A12Q1EHB4 618 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 BEX5Q5H9J7 111 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 ZNF480Q8WV37 535 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 SYT3Q9BQG1 590 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 APOOQ9BUR5 198 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 SMIM3Q9BZL3 60 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 RPS10P5Q9NQ39 176 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 NENFQ9UMX5 172 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 ZNF443Q9Y2A4 671 aaPredicted RBP16.54■□□□□ 0.24
NPHP4-209ENST00000489180 PIAS3Q9Y6X2 628 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 POM121CA8CG34 1229 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 TATDN3Q17R31 274 aa16.54■□□□□ 0.24
NPHP4-209ENST00000489180 ARSJQ5FYB0 599 aaPredicted RBP16.54■□□□□ 0.24
NPHP4-209ENST00000489180 KIAA1143Q96AT1 154 aaPredicted RBP16.54■□□□□ 0.24
NPHP4-209ENST00000489180 CNOT2Q9NZN8 540 aaKnown RBP16.54■□□□□ 0.24
NPHP4-209ENST00000489180 CHD2O14647 1828 aaKnown RBP16.54■□□□□ 0.24
NPHP4-209ENST00000489180 PIP5K1CO60331 668 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 RAB3AP20336 220 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 GABRB3P28472 473 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 BDKRB2P30411 391 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 AGAP6Q5VW22 663 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 MEX3BQ6ZN04 569 aaKnown RBP16.53■□□□□ 0.24
NPHP4-209ENST00000489180 MEPCEQ7L2J0 689 aaKnown RBP16.53■□□□□ 0.24
NPHP4-209ENST00000489180 MAVSQ7Z434 540 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 ESX1Q8N693 406 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 OR4D6Q8NGJ1 314 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 SAMD11Q96NU1 681 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 AGAP4Q96P64 663 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 FBRSQ9HAH7 460 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 RNF186Q9NXI6 227 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 C1orf196B1AJZ1 125 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 P04436 131 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 TFAP2AP05549 437 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 TIMP2P16035 220 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 BORAQ6PGQ7 559 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 ZNF160Q9HCG1 818 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 PLEKHJ1Q9NW61 149 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 POU2F3Q9UKI9 436 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms