RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 MGMTP16455 207 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 TSPAN8P19075 237 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 HNRNPA2B1P22626 353 aaKnown RBP2.81□□□□□ -1.96
SSR1-209ENST00000488834 IGHV1-2P23083 117 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 PSMA5P28066 241 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 HOXD10P28358 340 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 UGT1A3P35503 534 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 SCGB2A2Q13296 93 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 ZNF699Q32M78 642 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 DCAF4L1Q3SXM0 396 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 KCTD21Q4G0X4 260 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 ACSF3Q4G176 576 aaPredicted RBP2.81□□□□□ -1.96
SSR1-209ENST00000488834 SLX4IPQ5VYV7 408 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 ZNF544Q6NX49 715 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 PNCKQ6P2M8 343 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 SYT10Q6XYQ8 523 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 PARGQ86W56 976 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 C10orf67Q8IYJ2 551 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 RNF148Q8N7C7 305 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 FAM133AQ8N9E0 248 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 OR56B1Q8NGI3 324 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 ZNF564Q8TBZ8 553 aaPredicted RBP2.81□□□□□ -1.96
SSR1-209ENST00000488834 GIPC3Q8TF64 312 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 NCLNQ969V3 563 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 PINX1Q96BK5 328 aaKnown RBP2.81□□□□□ -1.96
SSR1-209ENST00000488834 NUS1Q96E22 293 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 CCDC51Q96ER9 411 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 C14orf79Q96F83 325 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 ELMO2Q96JJ3 720 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 WRAP53Q9BUR4 548 aaKnown RBP2.81□□□□□ -1.96
SSR1-209ENST00000488834 EDEM2Q9BV94 578 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 TPPP3Q9BW30 176 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 NMUR2Q9GZQ4 415 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 RAB33BQ9H082 229 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 GORASP2Q9H8Y8 452 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 ROPN1Q9HAT0 212 aaPredicted RBP2.81□□□□□ -1.96
SSR1-209ENST00000488834 GLRX2Q9NS18 164 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 STARD5Q9NSY2 213 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 DUS2Q9NX74 493 aaKnown RBP2.81□□□□□ -1.96
SSR1-209ENST00000488834 CHMP5Q9NZZ3 219 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 KLF2Q9Y5W3 355 aaPredicted RBP2.81□□□□□ -1.96
SSR1-209ENST00000488834 V9GYY5 206 aaPredicted RBP2.81□□□□□ -1.96
SSR1-209ENST00000488834 GRIN2DO15399 1336 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 UBE4BO95155 1302 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 PIK3R4Q99570 1358 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 PTPRUQ92729 1446 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 ZNF646O15015 1829 aaPredicted RBP2.81□□□□□ -1.96
SSR1-209ENST00000488834 WDR19Q8NEZ3 1342 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 A0A1B0GWJ7 208 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 TTC26A0AVF1 554 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 XKRY2A2RUG3 117 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 H3BTX0 84 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 CDX4O14627 284 aaPredicted RBP2.8□□□□□ -1.96
SSR1-209ENST00000488834 NEMFO60524 1076 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 ERLIN1O75477 346 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 SERF1AO75920 110 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 KRT6BP04259 564 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 ZCCHC18P0CG32 403 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 THRBP10828 461 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 GCFC2P16383 781 aaKnown RBP2.8□□□□□ -1.96
SSR1-209ENST00000488834 ZNF24P17028 368 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 DNAJB1P25685 340 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 PTPN6P29350 595 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 RDXP35241 583 aaKnown RBP2.8□□□□□ -1.96
SSR1-209ENST00000488834 KRT6CP48668 564 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 HLCSP50747 726 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 OSTNP61366 133 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 UBE2HP62256 183 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 DDX39BQ13838 428 aaKnown RBP2.8□□□□□ -1.96
SSR1-209ENST00000488834 KYAT1Q16773 422 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 CFAP221Q4G0U5 840 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 LRRC23Q53EV4 343 aaPredicted RBP2.8□□□□□ -1.96
SSR1-209ENST00000488834 TFAP2EQ6VUC0 442 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 ZNF573Q86YE8 665 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 ZCCHC7Q8N3Z6 543 aaKnown RBP2.8□□□□□ -1.96
SSR1-209ENST00000488834 FAM71CQ8NEG0 241 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 OR13C2Q8NGS9 318 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 SETD7Q8WTS6 366 aaKnown RBP2.8□□□□□ -1.96
SSR1-209ENST00000488834 PIBF1Q8WXW3 757 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 TTC25Q96NG3 672 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 RBM14Q96PK6 669 aaKnown RBP2.8□□□□□ -1.96
SSR1-209ENST00000488834 ZSCAN5AQ9BUG6 496 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 TMEM117Q9H0C3 514 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 POLD4Q9HCU8 107 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 YAE1D1Q9NRH1 226 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 SPATA7Q9P0W8 599 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 ZMAT5Q9UDW3 170 aaKnown RBP2.8□□□□□ -1.96
SSR1-209ENST00000488834 ATP6V1HQ9UI12 483 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 PDE10AQ9Y233 779 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 CROCCQ5TZA2 2017 aa2.8□□□□□ -1.96
SSR1-209ENST00000488834 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.79□□□□□ -1.96
SSR1-209ENST00000488834 ABCC4O15439 1325 aa2.79□□□□□ -1.96
SSR1-209ENST00000488834 TTC41PQ6P2S7 1318 aa2.79□□□□□ -1.96
SSR1-209ENST00000488834 PRRC2AP48634 2157 aaKnown RBP2.79□□□□□ -1.96
SSR1-209ENST00000488834 A0A087WZY1 265 aa2.79□□□□□ -1.96
SSR1-209ENST00000488834 ZSCAN5BA6NJL1 495 aa2.79□□□□□ -1.96
SSR1-209ENST00000488834 ANKRD30BLA7E2S9 258 aa2.79□□□□□ -1.96
SSR1-209ENST00000488834 E9PMD0 336 aa2.79□□□□□ -1.96
SSR1-209ENST00000488834 SGK494L7N484 410 aa2.79□□□□□ -1.96
SSR1-209ENST00000488834 M0QX08 132 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms