RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 CXCL2P19875 107 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 DRD5P21918 477 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 NFYAP23511 347 aaPredicted RBP13.25□□□□□ -0.29
RER1-207ENST00000488353 ATP6V1E1P36543 226 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 PNLIPRP1P54315 467 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 MANFP55145 182 aaKnown RBP13.25□□□□□ -0.29
RER1-207ENST00000488353 ST8SIA6P61647 398 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 HSPB3Q12988 150 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 ETFDHQ16134 617 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 SMARCD3Q6STE5 483 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 HMGN2P46Q86SG4 172 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 TPRA1Q86W33 373 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 MORN4Q8NDC4 146 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 COQ8AQ8NI60 647 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 SCARB1Q8WTV0 552 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 NPAS1Q99742 590 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 SARGQ9BW04 601 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 BEX1Q9HBH7 125 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 HPF1Q9NWY4 346 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 NLGN3Q9NZ94 848 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 RPS6KB2Q9UBS0 482 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 ICKQ9UPZ9 632 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 KIAA1549LQ6ZVL6 1849 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 TSPAN11A1L157 253 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 B3GALNT1O75752 331 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 UBXN7O94888 489 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 SHC1P29353 583 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 RPS7P62081 194 aaKnown RBP13.25□□□□□ -0.29
RER1-207ENST00000488353 LSM11P83369 360 aaKnown RBP eCLIP13.25□□□□□ -0.29
RER1-207ENST00000488353 DYRK1AQ13627 763 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 GRM7Q14831 915 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 RTL10Q7L3V2 364 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 OLIG3Q7RTU3 272 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 KCT2Q8NC54 265 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 OR5T2Q8NGG2 359 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 ST8SIA2Q92186 375 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 F2RL3Q96RI0 385 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 C20orf85Q9H1P6 137 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 TTYH1Q9H313 450 aaPredicted RBP13.25□□□□□ -0.29
RER1-207ENST00000488353 SAV1Q9H4B6 383 aaPredicted RBP13.25□□□□□ -0.29
RER1-207ENST00000488353 MAN2C1Q9NTJ4 1040 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 TCF20Q9UGU0 1960 aaKnown RBP13.25□□□□□ -0.29
RER1-207ENST00000488353 MYO9BQ13459 2157 aa13.25□□□□□ -0.29
RER1-207ENST00000488353 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 GSAPA4D1B5 854 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 TRABD2BA6NFA1 517 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 OR6C65A6NJZ3 312 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 ANHXE9PGG2 379 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 MT-ND4P03905 459 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 CALCRP30988 508 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 KIAA1024LP59773 190 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 DGCR2P98153 550 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 FAM78AQ5JUQ0 283 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 KIAA1161Q6NSJ0 714 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 SZRD1Q7Z422 152 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 LURAP1LQ8IV03 231 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 EIF4E3Q8N5X7 224 aaKnown RBP13.24□□□□□ -0.29
RER1-207ENST00000488353 ATOH1Q92858 354 aaPredicted RBP13.24□□□□□ -0.29
RER1-207ENST00000488353 WDR34Q96EX3 536 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 GIMAP5Q96F15 307 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 ZFP3Q96NJ6 502 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 USB1Q9BQ65 265 aaKnown RBP13.24□□□□□ -0.29
RER1-207ENST00000488353 CHIAQ9BZP6 476 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 NUMA1Q14980 2115 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 CEP290O15078 2479 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 SLC9B1P1A6NJY1 282 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 LRRN3E7EW58 273 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 C5orf67F2Z3F1 127 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 LILRB5O75023 590 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 POP7O75817 140 aaKnown RBP13.24□□□□□ -0.29
RER1-207ENST00000488353 ADH1CP00326 375 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 ANKRD34CP0C6C1 535 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 ACP5P13686 325 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 MAPK9P45984 424 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 GPR1P46091 355 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 CNTN1Q12860 1018 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 ZNF658BQ4V348 819 aaPredicted RBP13.24□□□□□ -0.29
RER1-207ENST00000488353 FNDC3BQ53EP0 1204 aaKnown RBP13.24□□□□□ -0.29
RER1-207ENST00000488353 RNASE12Q5GAN4 147 aaKnown RBP13.24□□□□□ -0.29
RER1-207ENST00000488353 AADACL4Q5VUY2 407 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 B3GNTL1Q67FW5 361 aaPredicted RBP13.24□□□□□ -0.29
RER1-207ENST00000488353 C17orf107Q6ZR85 190 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 TBC1D19Q8N5T2 526 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 OR5AR1Q8NGP9 310 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 PHOSPHO2Q8TCD6 241 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 LCORQ96JN0 433 aaPredicted RBP13.24□□□□□ -0.29
RER1-207ENST00000488353 LRRN3Q9H3W5 708 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 WDR26Q9H7D7 661 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 NPDC1Q9NQX5 325 aaPredicted RBP13.24□□□□□ -0.29
RER1-207ENST00000488353 NKIRAS2Q9NYR9 191 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 ASF1AQ9Y294 204 aa13.24□□□□□ -0.29
RER1-207ENST00000488353 MRPS7Q9Y2R9 242 aaKnown RBP13.24□□□□□ -0.29
RER1-207ENST00000488353 TCRBV16S1A1N1A0A5B0 115 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 M0R3H8 397 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 PLPP1O14494 284 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 SPINT1O43278 529 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 GMDSO60547 372 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 ITGA10O75578 1167 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 OR10A3P58181 314 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 S100A12P80511 92 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms