RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 MPP4Q96JB8 637 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 LMF1Q96S06 567 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 TUBA1CQ9BQE3 449 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 AASSQ9UDR5 926 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 GPN3Q9UHW5 284 aaPredicted RBP19.92■□□□□ 0.78
TRADD-202ENST00000486556 PCDHGB1Q9Y5G3 927 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 A0A0B4J2E0 115 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 A0A1B0GX12 115 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 CHP2O43745 196 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 CBFA2T3O75081 653 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 REM1O75628 298 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 UTS2O95399 124 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 SOX14O95416 240 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 RNF144AP50876 292 aaPredicted RBP19.92■□□□□ 0.78
TRADD-202ENST00000486556 PNLIPRP2P54317 469 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 C12orf73Q69YU5 71 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 CASP12Q6UXS9 341 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 PTCHD4Q6ZW05 846 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 CPEB2Q7Z5Q1 589 aaKnown RBP19.92■□□□□ 0.78
TRADD-202ENST00000486556 SLC34A3Q8N130 599 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 TMEM239Q8WW34 195 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 LPAR4Q99677 370 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 CRB3Q9BUF7 120 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 STRADBQ9C0K7 418 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 POLR1BQ9H9Y6 1135 aa19.92■□□□□ 0.78
TRADD-202ENST00000486556 SH3D21A4FU49 640 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 FAM86C2PA6NEL3 165 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 KLF4O43474 513 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 PRKNO60260 465 aaPredicted RBP19.91■□□□□ 0.78
TRADD-202ENST00000486556 GDF9O60383 454 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 FAM20BO75063 409 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 CNOT3O75175 753 aaKnown RBP19.91■□□□□ 0.78
TRADD-202ENST00000486556 ZNF28P17035 718 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 IL12BP29460 328 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 SNRPGP62308 76 aaKnown RBP19.91■□□□□ 0.78
TRADD-202ENST00000486556 RNF4P78317 190 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 CDK5Q00535 292 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 SMN1Q16637 294 aaKnown RBP19.91■□□□□ 0.78
TRADD-202ENST00000486556 ZBED5Q49AG3 693 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 ULK3Q6PHR2 472 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 HSDL2Q6YN16 418 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 APCDD1LQ8NCL9 501 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 FAM71CQ8NEG0 241 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 FAM46AQ96IP4 442 aaKnown RBP19.91■□□□□ 0.78
TRADD-202ENST00000486556 CDC6Q99741 560 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 TMEM9BQ9NQ34 198 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 PAK1IP1Q9NWT1 392 aaPredicted RBP19.91■□□□□ 0.78
TRADD-202ENST00000486556 VPS13AQ96RL7 3174 aa19.91■□□□□ 0.78
TRADD-202ENST00000486556 IGHV3-20A0A0C4DH32 117 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 TSPAN2O60636 221 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 NGFRP08138 427 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 ENDOUP21128 410 aaKnown RBP19.9■□□□□ 0.78
TRADD-202ENST00000486556 RAB15P59190 212 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 FNDC7Q5VTL7 733 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 ZNF517Q6ZMY9 492 aaPredicted RBP19.9■□□□□ 0.78
TRADD-202ENST00000486556 GPR141Q7Z602 305 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 CCDC103Q8IW40 242 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 CDK20Q8IZL9 346 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 SUMF1Q8NBK3 374 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 OR8K3Q8NH51 312 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 VMP1Q96GC9 406 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 ADOQ96SZ5 270 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 ULBP3Q9BZM4 244 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 C11orf16Q9NQ32 467 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 EXOSC3Q9NQT5 275 aaKnown RBP19.9■□□□□ 0.78
TRADD-202ENST00000486556 A0A1B0GWA3 101 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 ADAM11O75078 769 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 OR6B1O95007 311 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 IGFBP1P08833 259 aaPredicted RBP19.9■□□□□ 0.78
TRADD-202ENST00000486556 HTR1AP08908 422 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 PAX7P23759 505 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 RBM34P42696 430 aaKnown RBP19.9■□□□□ 0.78
TRADD-202ENST00000486556 SMSP52788 366 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 FOXL2P58012 376 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 PRKCDQ05655 676 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 PAPD4Q6PIY7 484 aaKnown RBP19.9■□□□□ 0.78
TRADD-202ENST00000486556 SLCO6A1Q86UG4 719 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 CLDN22Q8N7P3 220 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 OR8J1Q8NGP2 316 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 WDR36Q8NI36 951 aaKnown RBP19.9■□□□□ 0.78
TRADD-202ENST00000486556 NUBPLQ8TB37 319 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 TMIGD2Q96BF3 282 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 Q96MT0 163 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 ZPBPQ9BS86 351 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 EDEM2Q9BV94 578 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 NRSN2Q9GZP1 204 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 RBM38Q9H0Z9 239 aaKnown RBP19.9■□□□□ 0.78
TRADD-202ENST00000486556 AKIRIN1Q9H9L7 192 aaPredicted RBP19.9■□□□□ 0.78
TRADD-202ENST00000486556 SLC25A19Q9HC21 320 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 CLN6Q9NWW5 311 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 IL20Q9NYY1 176 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 FLRT3Q9NZU0 649 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 CNIH4Q9P003 139 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 RPS6KB2Q9UBS0 482 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 ZNF223Q9UK11 482 aaPredicted RBP19.9■□□□□ 0.78
TRADD-202ENST00000486556 TMEM5Q9Y2B1 443 aa19.9■□□□□ 0.78
TRADD-202ENST00000486556 DMDP11532 3685 aa19.89■□□□□ 0.77
TRADD-202ENST00000486556 NRG3P56975 720 aa19.89■□□□□ 0.77
TRADD-202ENST00000486556 COPZ1P61923 177 aa19.89■□□□□ 0.77
TRADD-202ENST00000486556 PLCXD2Q0VAA5 305 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms