RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 MLST8Q9BVC4 326 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 DUSP16Q9BY84 665 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 LRRC2Q9BYS8 371 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 GANQ9H2C0 597 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 INPP5EQ9NRR6 644 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 GKN1Q9NS71 199 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 MARCH5Q9NX47 278 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 NLGN3Q9NZ94 848 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 PLSCR5A0PG75 271 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 LRP5LA4QPB2 252 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 TMEM150CB9EJG8 249 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 NDUFB4O95168 129 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 GAS8O95995 478 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 IRF2P14316 349 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ATP1B2P14415 290 aaPredicted RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 NQO2P16083 231 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ZNF24P17028 368 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 GLRA1P23415 457 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 FOLR3P41439 243 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ALDH3B1P43353 468 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 OR1C1Q15619 314 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 PPP1R3AQ16821 1122 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 C6orf183Q5T699 404 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ZNF470Q6ECI4 717 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 CCDC137Q6PK04 289 aaKnown RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 CYP4V2Q6ZWL3 525 aaPredicted RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 VTCN1Q7Z7D3 282 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 MRGPREQ86SM8 312 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 FJX1Q86VR8 437 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 TRIM69Q86WT6 500 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 SYCE1Q8N0S2 351 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 SLC44A3Q8N4M1 653 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 MFSD9Q8NBP5 474 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 OR5L2Q8NGL0 311 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ELSPBP1Q96BH3 223 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 SLC47A1Q96FL8 570 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 TMEM19Q96HH6 336 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 HPDLQ96IR7 371 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 SLC38A2Q96QD8 506 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 GSDMCQ9BYG8 508 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 LRRN3Q9H3W5 708 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ZCCHC4Q9H5U6 513 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 DHX33Q9H6R0 707 aaKnown RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 IL26Q9NPH9 171 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 IL37Q9NZH6 218 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 CD300AQ9UGN4 299 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 PHF11Q9UIL8 331 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ZNF175Q9Y473 711 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 NPIPA3F8WFD2 350 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 SCO2O43819 266 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 SNX3O60493 162 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 H6PDO95479 791 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 TPM3P06753 285 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 CCNB1P14635 433 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ANPEPP15144 967 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 MYOGP15173 224 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 CHRNB2P17787 502 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 S100A5P33763 92 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 EVI2BP34910 448 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 HTR5AP47898 357 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 KCNK10P57789 538 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 DYNLL1P63167 89 aaKnown RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 MFGE8Q08431 387 aaPredicted RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 BST2Q10589 180 aaKnown RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 ART3Q13508 389 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 PEX6Q13608 980 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 KLF5Q13887 457 aaPredicted RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 NCF4Q15080 339 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 DCAF4L1Q3SXM0 396 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 POM121L1PQ3SYA9 428 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 PLAC9Q5JTB6 97 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 FNDC7Q5VTL7 733 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 DENND2CQ68D51 928 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 LRRC8BQ6P9F7 803 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 SERPINA9Q86WD7 417 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 HPS6Q86YV9 775 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 NECAB1Q8N987 351 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 FAM81AQ8TBF8 368 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 SLC26A7Q8TE54 656 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 SLC35C1Q96A29 364 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ZNF317Q96PQ6 595 aaPredicted RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 NEDD4LQ96PU5 975 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 CYTH2Q99418 400 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 MAP3K3Q99759 626 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 SPRTNQ9H040 489 aaPredicted RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 C10orf88Q9H8K7 445 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 COG4Q9H9E3 785 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 HMGXB4Q9UGU5 601 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ZNF469Q96JG9 3925 aaPredicted RBP2.92□□□□□ -1.94
SMC6-208ENST00000481708 DOCK6Q96HP0 2047 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 F5H6K3 240 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 B4GALT5O43286 388 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 GMDSO60547 372 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 JAK2O60674 1132 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 LRCH4O75427 683 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 SP1P08047 785 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 GNLYP22749 145 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 ACRV1P26436 265 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 MAGEA5P43359 124 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 PITX1P78337 314 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms