RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 PRKAR1BP31321 381 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 SSR4P51571 173 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 KCNJ10P78508 379 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 EXT1Q16394 746 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 NKAPLQ5M9Q1 402 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 SLC6A19Q695T7 634 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 PARM1Q6UWI2 310 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 SLC7A5P1Q8MH63 180 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 TMEM130Q8N3G9 435 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 RFT1Q96AA3 541 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 MUCL1Q96DR8 90 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 CCDC115Q96NT0 180 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 SORT1Q99523 831 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 SYT3Q9BQG1 590 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 ANKRD60Q9BZ19 345 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 DNTTIP1Q9H147 329 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 R3HDMLQ9H3Y0 253 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 VNN3Q9NY84 501 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 GHRLQ9UBU3 117 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 ZNF337Q9Y3M9 751 aa8.89□□□□□ -0.99
GARNL3-216ENST00000481242 LCATP04180 440 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 GPX3P22352 226 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 POU3F4P49335 361 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 HNRNPA0Q13151 305 aaKnown RBP8.88□□□□□ -0.99
GARNL3-216ENST00000481242 RSU1Q15404 277 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 UGT2A3Q6UWM9 527 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 LANCL3Q6ZV70 420 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 VASH1Q7L8A9 365 aaPredicted RBP8.88□□□□□ -0.99
GARNL3-216ENST00000481242 PRSS48Q7RTY5 328 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 VTCN1Q7Z7D3 282 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 NLRP8Q86W28 1048 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 OR8J2Q8NGG1 315 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 ZNF417Q8TAU3 575 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 SPOCK3Q9BQ16 436 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 C5AR2Q9P296 337 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 EXTL2Q9UBQ6 330 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 STUB1Q9UNE7 303 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 DDX60Q8IY21 1712 aaKnown RBP8.88□□□□□ -0.99
GARNL3-216ENST00000481242 OR6C70A6NIJ9 312 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 PRSS44E7EML9 344 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 GPR171O14626 319 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 SYT7O43581 403 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 EGFP01133 1207 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 APOFQ13790 326 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 SELPLGQ14242 412 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 C6orf132Q5T0Z8 1188 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 LIPKQ5VXJ0 399 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 TRNP1Q6NT89 227 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 SLCO4C1Q6ZQN7 724 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 PHOX2BQ99453 314 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 CENPOQ9BU64 300 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 OR10A5Q9H207 317 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 OR10A2Q9H208 303 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 BIN3Q9NQY0 253 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 PCDHGA7Q9Y5G6 932 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 WIF1Q9Y5W5 379 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 PLSCR5A0PG75 271 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 CTNSO60931 367 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 IGHG1P01857 330 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 SLC35E2P0CK97 266 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 MAZP56270 477 aaKnown RBP8.88□□□□□ -0.99
GARNL3-216ENST00000481242 SSTP61278 116 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 RAB11BQ15907 218 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 AGAP7PQ5VUJ5 663 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 SIGIRRQ6IA17 410 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 PLBD1Q6P4A8 553 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 TMED4Q7Z7H5 227 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 MFSD8Q8NHS3 518 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 GPR148Q8TDV2 347 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 BARD1Q99728 777 aaKnown RBP8.88□□□□□ -0.99
GARNL3-216ENST00000481242 C1QTNF2Q9BXJ5 285 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 ATG5Q9H1Y0 275 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 NELFAQ9H3P2 528 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 NMNAT1Q9HAN9 279 aaPredicted RBP8.88□□□□□ -0.99
GARNL3-216ENST00000481242 ZNF160Q9HCG1 818 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 SLC7A7Q9UM01 511 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 ITGB4P16144 1822 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 H3BML4 177 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 ZNF264O43296 627 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 LDB3O75112 727 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 ACTL6BO94805 426 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 MSX1P28360 303 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 GCAP28676 217 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 DCTP40126 519 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 ART1P52961 327 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 MLLT10P55197 1068 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 RAB5BP61020 215 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 C17orf67Q0P5P2 114 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 MADCAM1Q13477 382 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 KEAP1Q14145 624 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 ZNF613Q6PF04 617 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 KCTD20Q7Z5Y7 419 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 DTWD1Q8N5C7 304 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 OR8K3Q8NH51 312 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 OR5AK2Q8NH90 309 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 BPIFA2Q96DR5 249 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 ZNF587Q96SQ5 575 aaPredicted RBP8.88□□□□□ -0.99
GARNL3-216ENST00000481242 IER2Q9BTL4 223 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 VDAC3Q9Y277 283 aa8.88□□□□□ -0.99
GARNL3-216ENST00000481242 CORINQ9Y5Q5 1042 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms