RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 M0QX08 132 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 TO15178 435 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 ACOX3O15254 700 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 SUV39H1O43463 412 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 FCMRO60667 390 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 STX11O75558 287 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 MFN2O95140 757 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 HPP00738 406 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 IFNA14P01570 189 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 IGKV1D-16P01601 117 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 MT-ND1P03886 318 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 ALPPP05187 535 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 CELA2AP08217 269 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 RAP2AP10114 183 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 LIPCP11150 499 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 HOXB6P17509 224 aaKnown RBP6.12□□□□□ -1.43
USP48-208ENST00000479177 DRD5P21918 477 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 PIGAP37287 484 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 MAGEA2P43356 314 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 MAP1BP46821 2468 aaKnown RBP6.12□□□□□ -1.43
USP48-208ENST00000479177 ERVFRD-1P60508 538 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 AP2B1P63010 937 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 PSPHP78330 225 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 SSPNQ14714 243 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 EXT1Q16394 746 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.12□□□□□ -1.43
USP48-208ENST00000479177 FAM98BQ52LJ0 330 aaKnown RBP6.12□□□□□ -1.43
USP48-208ENST00000479177 FRYQ5TBA9 3013 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 AP1ARQ63HQ0 302 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 PLAG1Q6DJT9 500 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 DHRS4L2Q6PKH6 230 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 HSDL2Q6YN16 418 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 NDUFAF7Q7L592 441 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 VTCN1Q7Z7D3 282 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 HMGN2P46Q86SG4 172 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 COMTD1Q86VU5 262 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 KRT73Q86Y46 540 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 RAB43Q86YS6 212 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 ARMC8Q8IUR7 673 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 SLC34A3Q8N130 599 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 ZNF619Q8N2I2 560 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 BCORP1Q8N888 145 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 PAPD5Q8NDF8 572 aaKnown RBP6.12□□□□□ -1.43
USP48-208ENST00000479177 GPR32P1Q8NGA4 272 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 OR4N2Q8NGD1 307 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 OR10Q1Q8NGQ4 319 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 OR8K3Q8NH51 312 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 NUBPLQ8TB37 319 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 M1APQ8TC57 530 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 ELP5Q8TE02 316 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 ADAMTS17Q8TE56 1095 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 APOBEC4Q8WW27 367 aaKnown RBP6.12□□□□□ -1.43
USP48-208ENST00000479177 PMM1Q92871 262 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 NACC2Q96BF6 587 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 SLC47A1Q96FL8 570 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 PYURFQ96I23 114 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 LCORQ96JN0 433 aaPredicted RBP6.12□□□□□ -1.43
USP48-208ENST00000479177 DOHHQ9BU89 302 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 QRSL1Q9H0R6 528 aaKnown RBP6.12□□□□□ -1.43
USP48-208ENST00000479177 DCLRE1BQ9H816 532 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 GCM1Q9NP62 436 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 MMP25Q9NPA2 562 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 ARMC1Q9NVT9 282 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 FBXO34Q9NWN3 711 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 ADPRHL2Q9NX46 363 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 STX18Q9P2W9 335 aaKnown RBP6.12□□□□□ -1.43
USP48-208ENST00000479177 NKX1-2Q9UD57 310 aaPredicted RBP6.12□□□□□ -1.43
USP48-208ENST00000479177 IL17BQ9UHF5 180 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 RIMS3Q9UJD0 308 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 KCND3Q9UK17 655 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 FBXL4Q9UKA2 621 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 CBLCQ9ULV8 474 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 PTPRQQ9UMZ3 2332 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 PLA2G2DQ9UNK4 145 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 WASF3Q9UPY6 502 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 AURKCQ9UQB9 309 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 WDR45Q9Y484 360 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 OR10H1Q9Y4A9 318 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 AP4S1Q9Y587 144 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 NSG1A0A0A6YYJ2 146 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 NPIPA5A0A0B4J1W7 369 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 TRABD2BA6NFA1 517 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 PRAMEF25A6NGN4 478 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 AGAP5A6NIR3 686 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 TMEM200CA6NKL6 621 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 NPIPA7E9PJI5 369 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 SYT5O00445 386 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 PEX12O00623 359 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 TPST1O60507 370 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 SERPINB7O75635 380 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 TIPRLO75663 272 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 ZFAND5O76080 213 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 NADKO95544 446 aaPredicted RBP6.11□□□□□ -1.43
USP48-208ENST00000479177 IL33O95760 270 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 EPPINO95925 133 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 PABPC4LP0CB38 370 aaKnown RBP6.11□□□□□ -1.43
USP48-208ENST00000479177 NPIPA8P0DM63 369 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 NAT2P11245 290 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 FCGR1AP12314 374 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 LIFP15018 202 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms