RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 DEFA6Q01524 100 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 C17orf67Q0P5P2 114 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 ITGADQ13349 1161 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 PPA1Q15181 289 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 UAP1Q16222 522 aaPredicted RBP8.6□□□□□ -1.03
COL4A5-204ENST00000477429 CCNJQ5T5M9 372 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 FAM71E1Q6IPT2 247 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 ANKRD26P1Q6NSI1 321 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 CLEC2AQ6UVW9 174 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 CBLN3Q6UW01 205 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 Q6ZSR9 355 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 ESPNLQ6ZVH7 1005 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 ZNF551Q7Z340 670 aaPredicted RBP8.6□□□□□ -1.03
COL4A5-204ENST00000477429 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.6□□□□□ -1.03
COL4A5-204ENST00000477429 FAM110BQ8TC76 370 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 FAM168AQ92567 244 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 HOXB13Q92826 284 aaPredicted RBP8.6□□□□□ -1.03
COL4A5-204ENST00000477429 AMDHD1Q96NU7 426 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 BBS4Q96RK4 519 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 PSD2Q9BQI7 771 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 C1QTNF6Q9BXI9 259 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 HDHD5Q9BXW7 423 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 AMBRA1Q9C0C7 1298 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 ANKZF1Q9H8Y5 726 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 GLRX2Q9NS18 164 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 TIMM22Q9Y584 194 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 HYDINQ4G0P3 5121 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 NPIPA5A0A0B4J1W7 369 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 A0A1W2PNR3 127 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 NPIPA7E9PJI5 369 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 COQ9O75208 318 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 OTCP00480 354 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 IGHV3-9P01782 118 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 NPIPA8P0DM63 369 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 EGR1P18146 543 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 DDCP20711 480 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 EFNA1P20827 205 aaPredicted RBP8.59□□□□□ -1.03
COL4A5-204ENST00000477429 USF1P22415 310 aaPredicted RBP8.59□□□□□ -1.03
COL4A5-204ENST00000477429 CFPP27918 469 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 TIA1P31483 386 aaKnown RBP eCLIP8.59□□□□□ -1.03
COL4A5-204ENST00000477429 MPIP34949 423 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 SERPINB8P50452 374 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 ZNF83P51522 516 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 FOXA1P55317 472 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 SLC25A3Q00325 362 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 C2orf54Q08AI8 447 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 C2orf80Q0P641 193 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 GGTLC2Q14390 218 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 NRF1Q16656 503 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 MST1LQ2TV78 715 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 GLE1Q53GS7 698 aaKnown RBP8.59□□□□□ -1.03
COL4A5-204ENST00000477429 ZNF385BQ569K4 471 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 TMEM201Q5SNT2 666 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 AGAP6Q5VW22 663 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 FCRLAQ7L513 359 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 TRABD2AQ86V40 505 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 SLC16A11Q8NCK7 471 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 ATP6V1C2Q8NEY4 427 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 OR2W6PQ8NHA6 318 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 CDC26Q8NHZ8 85 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 FBXO27Q8NI29 283 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 DTNBP1Q96EV8 351 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 GIMAP5Q96F15 307 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 C16orf58Q96GQ5 468 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 EGLN2Q96KS0 407 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 Q9N2J8 555 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 TNFRSF12AQ9NP84 129 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 CBLN4Q9NTU7 201 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 SENP1Q9P0U3 644 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 LPAR3Q9UBY5 353 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 SNX6Q9UNH7 406 aa8.59□□□□□ -1.03
COL4A5-204ENST00000477429 A0A087WZY1 265 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 LOC100289279A0A1B0GTE1 492 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 CCDC189A1A4V9 331 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 CCDC188H7C350 402 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 H7C417 338 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 ZNF195O14628 629 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 SMAD9O15198 467 aaKnown RBP8.58□□□□□ -1.04
COL4A5-204ENST00000477429 NDUFB5O43674 189 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 PRKD3O94806 890 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 KCNK2O95069 426 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 NKX2-2O95096 273 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 PGM3O95394 542 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 H6PDO95479 791 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 YES1P07947 543 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 ANXA4P09525 319 aaPredicted RBP8.58□□□□□ -1.04
COL4A5-204ENST00000477429 SLC25A16P16260 332 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 ITGA2P17301 1181 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 COX5AP20674 150 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 IL2RGP31785 369 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 STX2P32856 288 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 OR3A2P47893 321 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 PSPHP78330 225 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 ZNF117Q03924 483 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 CLCQ05315 142 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 SLC29A2Q14542 456 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 DUSP5Q16690 384 aa8.58□□□□□ -1.04
COL4A5-204ENST00000477429 TMEM176BQ3YBM2 270 aaPredicted RBP8.58□□□□□ -1.04
COL4A5-204ENST00000477429 EXOSC6Q5RKV6 272 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms