RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 ATP13A2Q9NQ11 1180 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 MEPEQ9NQ76 525 aaPredicted RBP10.63□□□□□ -0.71
NUP188-205ENST00000477069 HINT3Q9NQE9 182 aaKnown RBP10.63□□□□□ -0.71
NUP188-205ENST00000477069 IL20RAQ9UHF4 553 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 PLCL2Q9UPR0 1127 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 PEX16Q9Y5Y5 336 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 IGHV5-51A0A0C4DH38 117 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 SOX6P35712 828 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 NXPH1P58417 271 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 SKP1P63208 163 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 ZNF45Q02386 682 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 FUT7Q11130 342 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 ZNF141Q15928 474 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 SHFQ7M4L6 423 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 CCDC190Q86UF4 302 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 PARP16Q8N5Y8 322 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 FANK1Q8TC84 345 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 ARSGQ96EG1 525 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 SLC38A3Q99624 504 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 PRTFDC1Q9NRG1 225 aa10.63□□□□□ -0.71
NUP188-205ENST00000477069 TLCD2A6NGC4 264 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 CCDC85CA6NKD9 419 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 ZNF749O43361 778 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 CHP2O43745 196 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 HYAL3O43820 417 aaPredicted RBP10.62□□□□□ -0.71
NUP188-205ENST00000477069 RFPL3O75679 317 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 CDC123O75794 336 aaPredicted RBP10.62□□□□□ -0.71
NUP188-205ENST00000477069 HMGN1P05114 100 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 CT45A8P0DMV1 189 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 CT45A9P0DMV2 189 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 IFI30P13284 250 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 SLC1A3P43003 542 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 BCAP31P51572 246 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 FGFBP1Q14512 234 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 AMZ1Q400G9 498 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 CT45A2Q5DJT8 189 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 LINC00114Q6XXX2 140 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 PLEKHG7Q6ZR37 379 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 LSMEM1Q8N8F7 131 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 ZSCAN1Q8NBB4 408 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 SLC35B4Q969S0 331 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 HS6ST2Q96MM7 605 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 NELL2Q99435 816 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 TEX12Q9BXU0 123 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 MRPS33Q9Y291 106 aaKnown RBP10.62□□□□□ -0.71
NUP188-205ENST00000477069 UGT2A1Q9Y4X1 527 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 CSNK1G3Q9Y6M4 447 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 LMO7DNF2Z398 122 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 AQP9O43315 295 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 MLLT3P42568 568 aaPredicted RBP10.62□□□□□ -0.71
NUP188-205ENST00000477069 STARD6P59095 220 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 STX4Q12846 297 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 FHL1Q13642 323 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 ERV3-1Q14264 604 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 LRIT3Q3SXY7 679 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 PLK5Q496M5 336 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 HSDL2Q6YN16 418 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 LYSMD2Q8IV50 215 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 LNX2Q8N448 690 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 ZNF615Q8N8J6 731 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 RCBTB1Q8NDN9 531 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 CD180Q99467 661 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 FOXQ1Q9C009 403 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 FN3KQ9H479 309 aa10.62□□□□□ -0.71
NUP188-205ENST00000477069 TXNL4BQ9NX01 149 aaKnown RBP10.62□□□□□ -0.71
NUP188-205ENST00000477069 LAMA1P25391 3075 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 OR2W5A6NFC9 320 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 PRAMEF2O60811 474 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 PTP4A3O75365 173 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 GALNSP34059 522 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 RANBP1P43487 201 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 ACSM1Q08AH1 577 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 UBXN2BQ14CS0 331 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 ZNHIT3Q15649 155 aaPredicted RBP10.61□□□□□ -0.71
NUP188-205ENST00000477069 ZNF181Q2M3W8 571 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 TRIM16LQ309B1 348 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 RPL13AP3Q6NVV1 102 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 CD200R1LQ6Q8B3 271 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 THSD4Q6ZMP0 1018 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 OR4F15Q8NGB8 312 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 GATAD2BQ8WXI9 593 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 BPIFA2Q96DR5 249 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 RBM18Q96H35 190 aaKnown RBP10.61□□□□□ -0.71
NUP188-205ENST00000477069 SPACA7Q96KW9 195 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 ZNF578Q96N58 590 aaPredicted RBP10.61□□□□□ -0.71
NUP188-205ENST00000477069 TGM7Q96PF1 710 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 EPHA6Q9UF33 1036 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 SIGLEC7Q9Y286 467 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 TMEM5Q9Y2B1 443 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 SPIN1Q9Y657 262 aaPredicted RBP10.61□□□□□ -0.71
NUP188-205ENST00000477069 A0A1B0GWA3 101 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 SAGE2PA6NJ88 616 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 H0YIG0 161 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 SOCS6O14544 535 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 LALBAP00709 142 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 NGFRP08138 427 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 MAOAP21397 527 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 S100A5P33763 92 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 EPHA4P54764 986 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 HSD17B7P56937 341 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms