RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 ATP6V1FQ16864 119 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 NKAIN1Q4KMZ8 207 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 PLA1AQ53H76 456 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 PYCR3Q53H96 274 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 ARHGAP15Q53QZ3 475 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 PRAMEF14Q5SWL7 426 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 SFRP5Q5T4F7 317 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 GCNT6Q5T4J0 391 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 HIST2H3PS2Q5TEC6 136 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 MFSD14CQ5VZR4 134 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 GSG1LQ6UXU4 331 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 SSX7Q7RTT5 188 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 ZNF367Q7RTV3 350 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 CACUL1Q86Y37 369 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 C1QL4Q86Z23 238 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 KLHDC8BQ8IXV7 354 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 SELENOHQ8IZQ5 122 aaKnown RBP3.88□□□□□ -1.79
CD55-208ENST00000476590 DNAJC5GQ8N7S2 189 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 C12orf76Q8N812 135 aaPredicted RBP3.88□□□□□ -1.79
CD55-208ENST00000476590 ZNF614Q8N883 585 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 TMEM185AQ8NFB2 350 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 OR10D4PQ8NGN7 298 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 OR4C6Q8NH72 309 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 FIBINQ8TAL6 211 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 LKAAEAR1Q8TD35 194 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 PIH1D2Q8WWB5 315 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 C14orf79Q96F83 325 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 ZNF419Q96HQ0 510 aaPredicted RBP3.88□□□□□ -1.79
CD55-208ENST00000476590 PIWIL1Q96J94 861 aaKnown RBP3.88□□□□□ -1.79
CD55-208ENST00000476590 HSH2DQ96JZ2 352 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 KREMEN1Q96MU8 473 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 INTS14Q96SY0 518 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 PRRT1Q99946 306 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 FUZQ9BT04 418 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 ADAT1Q9BUB4 502 aaKnown RBP3.88□□□□□ -1.79
CD55-208ENST00000476590 SEC11CQ9BY50 192 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 NLNQ9BYT8 704 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 POLR3FQ9H1D9 316 aaPredicted RBP3.88□□□□□ -1.79
CD55-208ENST00000476590 KIR3DX1Q9H7L2 352 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 ZNF430Q9H8G1 570 aaPredicted RBP3.88□□□□□ -1.79
CD55-208ENST00000476590 BARX1Q9HBU1 254 aaPredicted RBP3.88□□□□□ -1.79
CD55-208ENST00000476590 LTB4R2Q9NPC1 389 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 KRCC1Q9NPI7 259 aaPredicted RBP3.88□□□□□ -1.79
CD55-208ENST00000476590 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.88□□□□□ -1.791e-7■■■■■ 40.5
CD55-208ENST00000476590 SLC35D1Q9NTN3 355 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 FBXO34Q9NWN3 711 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 MTMR10Q9NXD2 777 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 ZNF282Q9UDV7 671 aaPredicted RBP3.88□□□□□ -1.79
CD55-208ENST00000476590 DKKL1Q9UK85 242 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 ZNF214Q9UL59 606 aaPredicted RBP3.88□□□□□ -1.79
CD55-208ENST00000476590 MRPS2Q9Y399 296 aaKnown RBP3.88□□□□□ -1.79
CD55-208ENST00000476590 DIP2CQ9Y2E4 1556 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 TNS3Q68CZ2 1445 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 COL1A2P08123 1366 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 PTPRJQ12913 1337 aa3.88□□□□□ -1.79
CD55-208ENST00000476590 A0A0A6YYH2 397 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 NKX6-3A6NJ46 265 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 A6NJ64 397 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 CLCA1A8K7I4 914 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 FAM171A2A8MVW0 826 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 H7C417 338 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 GFYI3L273 518 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 CXCL11O14625 94 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 OR2J2O76002 312 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 PROSCO94903 275 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 IL2RAP01589 272 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 MELTFP08582 738 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 ITGA5P08648 1049 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 OR2T7P0C7T2 308 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 GKN3PP0CG01 181 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 UBCP0CG48 685 aaKnown RBP3.87□□□□□ -1.79
CD55-208ENST00000476590 GIMD1P0DJR0 217 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 BMP3P12645 472 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 SELPP16109 830 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 GABRB1P18505 474 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 ADCYAP1P18509 176 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 APEX1P27695 318 aaKnown RBP3.87□□□□□ -1.79
CD55-208ENST00000476590 CD82P27701 267 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 EPHA8P29322 1005 aaPredicted RBP3.87□□□□□ -1.79
CD55-208ENST00000476590 SDC2P34741 201 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 PTPN7P35236 360 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 RPL22P35268 128 aaKnown RBP3.87□□□□□ -1.79
CD55-208ENST00000476590 NAA10P41227 235 aaPredicted RBP3.87□□□□□ -1.79
CD55-208ENST00000476590 MATKP42679 507 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 RAG2P55895 527 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 KLF3P57682 345 aaPredicted RBP3.87□□□□□ -1.79
CD55-208ENST00000476590 PPP3R1P63098 170 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 FAM189BP81408 668 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 SHC2P98077 582 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 RASGEF1BQ0VAM2 473 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 SCGB2A2Q13296 93 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 GTF2H2Q13888 395 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 SLC9A3R2Q15599 337 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 RNF151Q2KHN1 245 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 SOWAHAQ2M3V2 549 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 SPIN4Q56A73 249 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 EOGTQ5NDL2 527 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 NOL9Q5SY16 702 aaKnown RBP3.87□□□□□ -1.79
CD55-208ENST00000476590 NSUN5P2Q63ZY6 315 aa3.87□□□□□ -1.79
CD55-208ENST00000476590 ZNF57Q68EA5 555 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms