RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 VAPAQ9P0L0 249 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 PISDQ9UG56 409 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 IGKV6D-21A0A0A0MT36 114 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 CNMDO75829 334 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 IFNA1P01562 189 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 HSD17B1P14061 328 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 GABRA2P47869 451 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 MAT1AQ00266 395 aaKnown RBP10.31□□□□□ -0.76
VAPB-204ENST00000475243 CNIH2Q6PI25 160 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 OR13J1Q8NGT2 312 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 OR51Q1Q8NH59 317 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 STK35Q8TDR2 534 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 COQ3Q9NZJ6 369 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 LAMA4Q16363 1823 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 MROH6A6NGR9 719 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 J3KTA2 159 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 DOK2O60496 412 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 ZNF254O75437 659 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 SCGB2A1O75556 95 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 CTSCP53634 463 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 ERVK-16P61578 105 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 PLCXD3Q63HM9 321 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 KIAA1211LQ6NV74 962 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 CD163Q86VB7 1156 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 ASF1BQ9NVP2 202 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 IL17CQ9P0M4 197 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 AGPAT2O15120 278 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 ARPC5O15511 151 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 HPGDSO60760 199 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 RETP07949 1114 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 IL32P24001 234 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 HNRNPA1L2Q32P51 320 aaKnown RBP10.31□□□□□ -0.76
VAPB-204ENST00000475243 VASNQ6EMK4 673 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 KDM1BQ8NB78 822 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 PIGCQ92535 297 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 DDX31Q9H8H2 851 aaKnown RBP10.31□□□□□ -0.76
VAPB-204ENST00000475243 GPN2Q9H9Y4 310 aaPredicted RBP10.31□□□□□ -0.76
VAPB-204ENST00000475243 ACOT13Q9NPJ3 140 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 GPR50Q13585 617 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 MELKQ14680 651 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 GPR149Q86SP6 731 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 ASCC1Q8N9N2 400 aaKnown RBP10.3□□□□□ -0.76
VAPB-204ENST00000475243 PPP1R14DQ9NXH3 145 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 SLC6A8P48029 635 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 CSNK1A1P48729 337 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 SEC61A1P61619 476 aaKnown RBP10.3□□□□□ -0.76
VAPB-204ENST00000475243 ENTPD8Q5MY95 495 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 ABHD12BQ7Z5M8 362 aaPredicted RBP10.3□□□□□ -0.76
VAPB-204ENST00000475243 CCDC28AQ8IWP9 274 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 CCDC71LQ8N9Z2 235 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 IL17RDQ8NFM7 739 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 TMIGD2Q96BF3 282 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 OR7D2Q96RA2 312 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 PLSCR5A0PG75 271 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 ANKRD30BLA7E2S9 258 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 RNASET2O00584 256 aaKnown RBP10.3□□□□□ -0.76
VAPB-204ENST00000475243 CASC3O15234 703 aaKnown RBP10.3□□□□□ -0.76
VAPB-204ENST00000475243 SLC22A5O76082 557 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 ARSBP15848 533 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 RAB3AP20336 220 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 SERPINA2P20848 420 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 CMTM1Q8IZ96 169 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 MCTS1Q9ULC4 181 aaKnown RBP10.3□□□□□ -0.76
VAPB-204ENST00000475243 POLHQ9Y253 713 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 PCDHGA1Q9Y5H4 931 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 GJA5P36382 358 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 LCTLQ6UWM7 567 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 KANSL1Q7Z3B3 1105 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 GTPBP8Q8N3Z3 284 aaPredicted RBP10.3□□□□□ -0.76
VAPB-204ENST00000475243 OR1S1Q8NH92 325 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 C17orf50Q8WW18 174 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 ULBP3Q9BZM4 244 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 OR51E2Q9H255 320 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 FOLH1BQ9HBA9 442 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 TESQ9UGI8 421 aaKnown RBP10.3□□□□□ -0.76
VAPB-204ENST00000475243 MAGED1Q9Y5V3 778 aaPredicted RBP10.3□□□□□ -0.76
VAPB-204ENST00000475243 DVL2O14641 736 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 PABPC4LP0CB38 370 aaKnown RBP10.3□□□□□ -0.76
VAPB-204ENST00000475243 AGTR1P30556 359 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 GABARAPL2P60520 117 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 NFATC3Q12968 1075 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 SLC22A10Q63ZE4 541 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 ANKRD13BQ86YJ7 626 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 PAPD5Q8NDF8 572 aaKnown RBP10.3□□□□□ -0.76
VAPB-204ENST00000475243 BBS1Q8NFJ9 593 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 ARL5BQ96KC2 179 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 ZNF681Q96N22 645 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 EDARQ9UNE0 448 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 PCM1Q15154 2024 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 COL2A1P02458 1487 aaPredicted RBP10.3□□□□□ -0.76
VAPB-204ENST00000475243 ARGFXA6NJG6 315 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 EFCAB7A8K855 629 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 FAM155AB1AL88 458 aaPredicted RBP10.3□□□□□ -0.76
VAPB-204ENST00000475243 TFP02787 698 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 C7P10643 843 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 APEHP13798 732 aaKnown RBP10.3□□□□□ -0.76
VAPB-204ENST00000475243 SGPP2Q8IWX5 399 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 TCEAL8Q8IYN2 117 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 RSC1A1Q92681 617 aa10.3□□□□□ -0.76
VAPB-204ENST00000475243 BPIFA2Q96DR5 249 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms