RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.4■□□□□ 0.06
CCM2-205ENST00000472223 RBMXL3Q8N7X1 1067 aaKnown RBP15.4■□□□□ 0.06
CCM2-205ENST00000472223 RNF138Q8WVD3 245 aa15.4■□□□□ 0.06
CCM2-205ENST00000472223 PNPLA2Q96AD5 504 aa15.4■□□□□ 0.06
CCM2-205ENST00000472223 TAMM41Q96BW9 452 aa15.4■□□□□ 0.06
CCM2-205ENST00000472223 SH3YL1Q96HL8 342 aaPredicted RBP15.4■□□□□ 0.06
CCM2-205ENST00000472223 UGT2B28Q9BY64 529 aa15.4■□□□□ 0.06
CCM2-205ENST00000472223 ZFP64Q9NPA5 681 aa15.4■□□□□ 0.06
CCM2-205ENST00000472223 DCAF13Q9NV06 445 aaKnown RBP15.4■□□□□ 0.06
CCM2-205ENST00000472223 SLC7A8Q9UHI5 535 aa15.4■□□□□ 0.06
CCM2-205ENST00000472223 KCNE5Q9UJ90 142 aa15.4■□□□□ 0.06
CCM2-205ENST00000472223 PRDM4Q9UKN5 801 aa15.4■□□□□ 0.06
CCM2-205ENST00000472223 POMPQ9Y244 141 aa15.4■□□□□ 0.06
CCM2-205ENST00000472223 SH3GLB1Q9Y371 365 aa15.4■□□□□ 0.06
CCM2-205ENST00000472223 SYT5O00445 386 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 SNPHO15079 494 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 GCM2O75603 506 aaPredicted RBP15.39■□□□□ 0.05
CCM2-205ENST00000472223 FESP07332 822 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 LINGO3P0C6S8 592 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 NQO1P15559 274 aaKnown RBP15.39■□□□□ 0.05
CCM2-205ENST00000472223 HOXB6P17509 224 aaKnown RBP15.39■□□□□ 0.05
CCM2-205ENST00000472223 PGCP20142 388 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 IFNA8P32881 189 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 RNF144AP50876 292 aaPredicted RBP15.39■□□□□ 0.05
CCM2-205ENST00000472223 ZNF41P51814 821 aaPredicted RBP15.39■□□□□ 0.05
CCM2-205ENST00000472223 SUMO3P55854 103 aaPredicted RBP15.39■□□□□ 0.05
CCM2-205ENST00000472223 RGS8P57771 180 aaPredicted RBP15.39■□□□□ 0.05
CCM2-205ENST00000472223 EEF1A1P68104 462 aaKnown RBP15.39■□□□□ 0.05
CCM2-205ENST00000472223 KLRB1Q12918 225 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 TIGD3Q6B0B8 471 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 OR5M10Q6IEU7 315 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 LCN8Q6JVE9 175 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 RPUSD3Q6P087 351 aaKnown RBP15.39■□□□□ 0.05
CCM2-205ENST00000472223 RANBP3LQ86VV4 465 aaPredicted RBP15.39■□□□□ 0.05
CCM2-205ENST00000472223 SLC22A16Q86VW1 577 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 SPATA24Q86W54 205 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 GRAMD2AQ8IUY3 354 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 ZNF563Q8TA94 476 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 SLC35B4Q969S0 331 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 FRMD6Q96NE9 622 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 HES7Q9BYE0 225 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 EXOSC3Q9NQT5 275 aaKnown RBP15.39■□□□□ 0.05
CCM2-205ENST00000472223 CSAG2Q9Y5P2 127 aa15.39■□□□□ 0.05
CCM2-205ENST00000472223 MGAQ8IWI9 3026 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 CENPVL1A0A0U1RR11 272 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 AQP12BA6NM10 295 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 K7EM74 188 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 AP3D1O14617 1153 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 GMFGO60234 142 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 TRIM3O75382 744 aaPredicted RBP15.38■□□□□ 0.05
CCM2-205ENST00000472223 SORBS2O94875 1100 aaKnown RBP15.38■□□□□ 0.05
CCM2-205ENST00000472223 LGI1O95970 557 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 CRYABP02511 175 aaKnown RBP15.38■□□□□ 0.05
CCM2-205ENST00000472223 GCKP35557 465 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 PTGDSP41222 190 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 CD97P48960 835 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 GAS1P54826 345 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 MS4A2Q01362 244 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 GANABQ14697 944 aaKnown RBP15.38■□□□□ 0.05
CCM2-205ENST00000472223 CD226Q15762 336 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 DUSP7Q16829 419 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 FAM98BQ52LJ0 330 aaKnown RBP15.38■□□□□ 0.05
CCM2-205ENST00000472223 IFI44LQ53G44 452 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 AQP12AQ8IXF9 295 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 EXD3Q8N9H8 876 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 OR5W2Q8NH69 310 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 GEMIN6Q8WXD5 167 aaKnown RBP15.38■□□□□ 0.05
CCM2-205ENST00000472223 TMEM234Q8WY98 164 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 PYURFQ96I23 114 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 RSRC1Q96IZ7 334 aaKnown RBP15.38■□□□□ 0.05
CCM2-205ENST00000472223 UBL7Q96S82 380 aaPredicted RBP15.38■□□□□ 0.05
CCM2-205ENST00000472223 DSN1Q9H410 356 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 OLAHQ9NV23 265 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 RLIMQ9NVW2 624 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 TUBA8Q9NY65 449 aaPredicted RBP15.38■□□□□ 0.05
CCM2-205ENST00000472223 SELENONQ9NZV5 590 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 MED11Q9P086 117 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 RPS6KB2Q9UBS0 482 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 DKKL1Q9UK85 242 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 LAMA5O15230 3695 aa15.38■□□□□ 0.05
CCM2-205ENST00000472223 DSPP15924 2871 aaKnown RBP15.38■□□□□ 0.05
CCM2-205ENST00000472223 LOC400499M0QZD8 3231 aa15.37■□□□□ 0.05
CCM2-205ENST00000472223 IGLV3-32A0A0A0MS00 114 aa15.37■□□□□ 0.05
CCM2-205ENST00000472223 CLDN24A6NM45 220 aa15.37■□□□□ 0.05
CCM2-205ENST00000472223 ACOT8O14734 319 aa15.37■□□□□ 0.05
CCM2-205ENST00000472223 TPST1O60507 370 aa15.37■□□□□ 0.05
CCM2-205ENST00000472223 TRAPPC6AO75865 159 aa15.37■□□□□ 0.05
CCM2-205ENST00000472223 IFNW1P05000 195 aa15.37■□□□□ 0.05
CCM2-205ENST00000472223 UMPSP11172 480 aa15.37■□□□□ 0.05
CCM2-205ENST00000472223 ITGA2P17301 1181 aa15.37■□□□□ 0.05
CCM2-205ENST00000472223 PSMA4P25789 261 aaKnown RBP15.37■□□□□ 0.05
CCM2-205ENST00000472223 GDF1P27539 372 aa15.37■□□□□ 0.05
CCM2-205ENST00000472223 RYKP34925 604 aa15.37■□□□□ 0.05
CCM2-205ENST00000472223 DSCR4P56555 118 aaPredicted RBP15.37■□□□□ 0.05
CCM2-205ENST00000472223 PPIAP62937 165 aaKnown RBP15.37■□□□□ 0.05
CCM2-205ENST00000472223 KCNC4Q03721 635 aa15.37■□□□□ 0.05
CCM2-205ENST00000472223 ZNF117Q03924 483 aa15.37■□□□□ 0.05
CCM2-205ENST00000472223 CHRNB3Q05901 458 aa15.37■□□□□ 0.05
CCM2-205ENST00000472223 PLEKHN1Q494U1 663 aaPredicted RBP15.37■□□□□ 0.05
CCM2-205ENST00000472223 FNDC7Q5VTL7 733 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms