RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 HBMQ6B0K9 141 aa20.19■□□□□ 0.82
C9orf3-213ENST00000471978 PHOSPHO1Q8TCT1 267 aa20.19■□□□□ 0.82
C9orf3-213ENST00000471978 ADAMTS15Q8TE58 950 aa20.19■□□□□ 0.82
C9orf3-213ENST00000471978 COQ8BQ96D53 544 aa20.19■□□□□ 0.82
C9orf3-213ENST00000471978 HOXD1Q9GZZ0 328 aa20.19■□□□□ 0.82
C9orf3-213ENST00000471978 GSX1Q9H4S2 264 aaPredicted RBP20.19■□□□□ 0.82
C9orf3-213ENST00000471978 A0A0J9YW62 118 aa20.18■□□□□ 0.82
C9orf3-213ENST00000471978 KRT16P08779 473 aa20.18■□□□□ 0.82
C9orf3-213ENST00000471978 LINGO3P0C6S8 592 aa20.18■□□□□ 0.82
C9orf3-213ENST00000471978 PRPS1L1P21108 318 aa20.18■□□□□ 0.82
C9orf3-213ENST00000471978 EIF1P41567 113 aaKnown RBP20.18■□□□□ 0.82
C9orf3-213ENST00000471978 RNF144AP50876 292 aaPredicted RBP20.18■□□□□ 0.82
C9orf3-213ENST00000471978 NKX6-1P78426 367 aaPredicted RBP20.18■□□□□ 0.82
C9orf3-213ENST00000471978 ZNF117Q03924 483 aa20.18■□□□□ 0.82
C9orf3-213ENST00000471978 DCST2Q5T1A1 773 aa20.18■□□□□ 0.82
C9orf3-213ENST00000471978 C22orf34Q6ZV56 151 aa20.18■□□□□ 0.82
C9orf3-213ENST00000471978 MTERF4Q7Z6M4 381 aaKnown RBP20.18■□□□□ 0.82
C9orf3-213ENST00000471978 CXorf67Q86X51 503 aaPredicted RBP20.18■□□□□ 0.82
C9orf3-213ENST00000471978 LILRA2Q8N149 483 aa20.18■□□□□ 0.82
C9orf3-213ENST00000471978 ZNF527Q8NB42 609 aa20.18■□□□□ 0.82
C9orf3-213ENST00000471978 AENQ8WTP8 325 aaKnown RBP20.18■□□□□ 0.82
C9orf3-213ENST00000471978 TUBGCP3Q96CW5 907 aa20.18■□□□□ 0.82
C9orf3-213ENST00000471978 POM121Q96HA1 1249 aa20.18■□□□□ 0.82
C9orf3-213ENST00000471978 GLRX2Q9NS18 164 aa20.18■□□□□ 0.82
C9orf3-213ENST00000471978 GPATCH2Q9NW75 528 aa20.18■□□□□ 0.82
C9orf3-213ENST00000471978 KCNE3Q9Y6H6 103 aa20.18■□□□□ 0.82
C9orf3-213ENST00000471978 NPIPA5A0A0B4J1W7 369 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 NPIPA7E9PJI5 369 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 CFLARO15519 480 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 TYROBPO43914 113 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 NPIPA8P0DM63 369 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 IL11P20809 199 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 KLHL26Q53HC5 615 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 EMBQ6PCB8 327 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 RIMKLAQ8IXN7 391 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 SFXN5Q8TD22 340 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 OSTF1Q92882 214 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 CAVIN3Q969G5 261 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 MOAP1Q96BY2 351 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 MARK4Q96L34 752 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 KLHL15Q96M94 604 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 BHLHE41Q9C0J9 482 aaPredicted RBP20.17■□□□□ 0.82
C9orf3-213ENST00000471978 UBTD1Q9HAC8 227 aa20.17■□□□□ 0.82
C9orf3-213ENST00000471978 H3BNH8 94 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 OIP5O43482 229 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 SOX30O94993 753 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 NUDT14O95848 222 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 SFTPDP35247 375 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 ETV4P43268 484 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 CARD18P57730 90 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 FOXF1Q12946 379 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 ACKR1Q16570 336 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 CBLN3Q6UW01 205 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 KRTAP1-3Q8IUG1 177 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 NUDCD3Q8IVD9 361 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 OR5AK3PQ8NH89 298 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 PPP1R14CQ8TAE6 165 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 PIGTQ969N2 578 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 DUSP26Q9BV47 211 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 CARD8Q9Y2G2 431 aa20.16■□□□□ 0.82
C9orf3-213ENST00000471978 SMPD2O60906 423 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 G6PDP11413 515 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 FPR1P21462 350 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 ELK4P28324 431 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 P2RX1P51575 399 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 ATP12AP54707 1039 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 MAD2L1Q13257 205 aaPredicted RBP20.15■□□□□ 0.82
C9orf3-213ENST00000471978 PGS1Q32NB8 556 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 KRTAP21-3Q3LHN1 58 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.15■□□□□ 0.82
C9orf3-213ENST00000471978 SHEQ5VZ18 495 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 GTF2IRD2BQ6EKJ0 949 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 GTF2IRD2Q86UP8 949 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 HS3ST6Q96QI5 342 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 OR7D2Q96RA2 312 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 PIP5K1AQ99755 562 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 FANCFQ9NPI8 374 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 ICAM5Q9UMF0 924 aa20.15■□□□□ 0.82
C9orf3-213ENST00000471978 GTPBP1O00178 669 aaKnown RBP20.14■□□□□ 0.81
C9orf3-213ENST00000471978 ARHGEF9O43307 516 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 THBDP07204 575 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 PPP3CBP16298 524 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 ADH6P28332 368 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 SHC1P29353 583 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 SOAT1P35610 550 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 SUMO3P55854 103 aaPredicted RBP20.14■□□□□ 0.81
C9orf3-213ENST00000471978 HBA1P69905 142 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 EMX2Q04743 252 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 BHLHB9Q6PI77 547 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 STAC2Q6ZMT1 411 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 BEND4Q6ZU67 534 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 STK32CQ86UX6 486 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 ZNF614Q8N883 585 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 OR5D16Q8NGK9 328 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 FBXO27Q8NI29 283 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 ROBO4Q8WZ75 1007 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 REXO5Q96IC2 774 aaKnown RBP20.14■□□□□ 0.81
C9orf3-213ENST00000471978 PKNOX2Q96KN3 472 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 CCL19Q99731 98 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 TMEM109Q9BVC6 243 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms