RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 MOKQ9UQ07 419 aa2.79□□□□□ -1.96
BRCA2-202ENST00000470094 EIF3LQ9Y262 564 aaKnown RBP2.79□□□□□ -1.96
BRCA2-202ENST00000470094 GSTK1Q9Y2Q3 226 aa2.79□□□□□ -1.96
BRCA2-202ENST00000470094 EXOSC1Q9Y3B2 195 aaKnown RBP2.79□□□□□ -1.96
BRCA2-202ENST00000470094 PTCH1Q13635 1447 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 KIF16BQ96L93 1317 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 MFSD2BA6NFX1 497 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 FRG2CA6NGY1 282 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 G3V3Y1 287 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 OR1F1O43749 312 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 TYROBPO43914 113 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 LCMT2O60294 686 aaKnown RBP2.78□□□□□ -1.96
BRCA2-202ENST00000470094 LYPD3O95274 346 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 ADCY5O95622 1261 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 WNT2P09544 360 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 HOXB7P09629 217 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 P0C879 139 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 HNF1AP20823 631 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 TBXA2RP21731 343 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 IDSP22304 550 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 CALB2P22676 271 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 POU3F4P49335 361 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 ZNF33BQ06732 778 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 ASAH1Q13510 395 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 CHI3L2Q15782 390 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 UBE2V2Q15819 145 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 ISXQ2M1V0 245 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 BOLA3Q53S33 107 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 CELF3Q5SZQ8 465 aaKnown RBP2.78□□□□□ -1.96
BRCA2-202ENST00000470094 C9orf129Q5T035 196 aaKnown RBP2.78□□□□□ -1.96
BRCA2-202ENST00000470094 PRR5LQ6MZQ0 368 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 PMF1Q6P1K2 205 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 BTNL3Q6UXE8 466 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 LRRC70Q7Z2Q7 622 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 TMEM17Q86X19 198 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 APOBEC3FQ8IUX4 373 aaKnown RBP2.78□□□□□ -1.96
BRCA2-202ENST00000470094 FBXO16Q8IX29 292 aaPredicted RBP2.78□□□□□ -1.96
BRCA2-202ENST00000470094 ZNF683Q8IZ20 524 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 GPR137CQ8N3F9 429 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 EIF1ADQ8N9N8 165 aaKnown RBP2.78□□□□□ -1.96
BRCA2-202ENST00000470094 RFESDQ8TAC1 157 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 CTNNBL1Q8WYA6 563 aaPredicted RBP2.78□□□□□ -1.96
BRCA2-202ENST00000470094 FAM3CQ92520 227 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 ART4Q93070 314 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 C11orf24Q96F05 449 aaPredicted RBP2.78□□□□□ -1.96
BRCA2-202ENST00000470094 MAGEB18Q96M61 343 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 FEM1AQ9BSK4 669 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 NFKBIZQ9BYH8 718 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 COMMD4Q9H0A8 199 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 VCX2Q9H322 139 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 ASB8Q9H765 288 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 LRRC40Q9H9A6 602 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 CYTH4Q9UIA0 394 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 ANAPC7Q9UJX3 599 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 SMC3Q9UQE7 1217 aa2.78□□□□□ -1.96
BRCA2-202ENST00000470094 C11orf98E9PRG8 122 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 UBXN8O00124 270 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 CDX4O14627 284 aaPredicted RBP2.77□□□□□ -1.97
BRCA2-202ENST00000470094 CASKO14936 926 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 NUDT21O43809 227 aaKnown RBP2.77□□□□□ -1.97
BRCA2-202ENST00000470094 EFNA2O43921 213 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 STX11O75558 287 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 JCHAINP01591 159 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 CT45A10P0DMU9 189 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 H2AFXP16104 143 aaPredicted RBP2.77□□□□□ -1.97
BRCA2-202ENST00000470094 XRCC1P18887 633 aaPredicted RBP2.77□□□□□ -1.97
BRCA2-202ENST00000470094 TPSB2P20231 275 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 IGFBP5P24593 272 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 XCR1P46094 333 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 DHPSP49366 369 aaPredicted RBP2.77□□□□□ -1.97
BRCA2-202ENST00000470094 SULT1E1P49888 294 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 P2RY4P51582 365 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 SERTAD2Q14140 314 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 ATXN7L3Q14CW9 347 aaPredicted RBP2.77□□□□□ -1.97
BRCA2-202ENST00000470094 RAB35Q15286 201 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 TPSAB1Q15661 275 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 ZIC1Q15915 447 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 ZNF658Q5TYW1 1059 aaPredicted RBP2.77□□□□□ -1.97
BRCA2-202ENST00000470094 KIAA1328Q86T90 577 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 ANKFN1Q8N957 763 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 OR13C2Q8NGS9 318 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 TRMT10AQ8TBZ6 339 aaKnown RBP2.77□□□□□ -1.97
BRCA2-202ENST00000470094 EMG1Q92979 244 aaKnown RBP2.77□□□□□ -1.97
BRCA2-202ENST00000470094 SLC41A3Q96GZ6 507 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 VSIG2Q96IQ7 327 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 CNDP1Q96KN2 507 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 RIT2Q99578 217 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 ZBTB18Q99592 522 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 CCT7Q99832 543 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 OMDQ99983 421 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 TMEM121Q9BTD3 319 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 RHOJQ9H4E5 214 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 ELOVL3Q9HB03 270 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 APMAPQ9HDC9 416 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 UTP6Q9NYH9 597 aaKnown RBP2.77□□□□□ -1.97
BRCA2-202ENST00000470094 DPM3Q9P2X0 92 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 KLHL21Q9UJP4 597 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 WDR45Q9Y484 360 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 SPACA6W5XKT8 324 aa2.77□□□□□ -1.97
BRCA2-202ENST00000470094 EPOPA6NHQ4 379 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 408 ms