RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 KCNE3Q9Y6H6 103 aa13.24□□□□□ -0.29
SDCCAG3-209ENST00000468963 FREM1Q5H8C1 2179 aa13.24□□□□□ -0.29
SDCCAG3-209ENST00000468963 ABCA2Q9BZC7 2435 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 USF3Q68DE3 2245 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 TNFSF11O14788 317 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 OIP5O43482 229 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 HPGDP15428 266 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 MAPK1P28482 360 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 SERPINB5P36952 375 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 HPCAL1P37235 193 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 ZNF41P51814 821 aaPredicted RBP13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 PTGR1Q14914 329 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 EXOC3L2Q2M3D2 409 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 IL23RQ5VWK5 629 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 STAC2Q6ZMT1 411 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 MTERF4Q7Z6M4 381 aaKnown RBP13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 RIMKLAQ8IXN7 391 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 LILRA2Q8N149 483 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 NATD1Q8N6N6 113 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 ZC3HAV1LQ96H79 300 aaKnown RBP13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 ACTRT3Q9BYD9 372 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 HOXD1Q9GZZ0 328 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 MCTS1Q9ULC4 181 aaKnown RBP13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 ICAM5Q9UMF0 924 aa13.23□□□□□ -0.29
SDCCAG3-209ENST00000468963 NPIPB9F8W1W9 429 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 ARHGEF9O43307 516 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 SOX30O94993 753 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 SYNGR4O95473 234 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 C6orf47O95873 294 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 BPGMP07738 259 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 PPP3CBP16298 524 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 FPR1P21462 350 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 ADH6P28332 368 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 SHC1P29353 583 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 EIF1P41567 113 aaKnown RBP13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 ETV4P43268 484 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 CTBP2P56545 445 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 CARD18P57730 90 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 VSNL1P62760 191 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 ZNF117Q03924 483 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 LSM12Q3MHD2 195 aaKnown RBP13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 ATP6AP1LQ52LC2 224 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 HBMQ6B0K9 141 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 CBLN3Q6UW01 205 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 KRTCAP2Q8N6L1 136 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 AGR3Q8TD06 166 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 ADAMTS15Q8TE58 950 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 IGFBPL1Q8WX77 278 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 JADE3Q92613 823 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 ZNF524Q96C55 264 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 C1orf50Q9BV19 199 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 TMEM185BQ9H7F4 350 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 SNX8Q9Y5X2 465 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 ACTL7BQ9Y614 415 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 JMJD1CQ15652 2540 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 DNHD1Q96M86 4753 aa13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 FN1P02751 2386 aaKnown RBP13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 ANK3Q12955 4377 aaKnown RBP13.22□□□□□ -0.29
SDCCAG3-209ENST00000468963 NPIPA5A0A0B4J1W7 369 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 NPIPA7E9PJI5 369 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 TYROBPO43914 113 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 SMPD2O60906 423 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 PLGP00747 810 aaPredicted RBP13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 INHBBP09529 407 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 NPIPA8P0DM63 369 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 ATP12AP54707 1039 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 C21orf58P58505 322 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 PDSS1Q5T2R2 415 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 GTF2IRD2BQ6EKJ0 949 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 PPP4R4Q6NUP7 873 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 PRSS57Q6UWY2 283 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 BEND4Q6ZU67 534 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 GTF2IRD2Q86UP8 949 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 FNDC5Q8NAU1 212 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 OR56A1Q8NGH5 318 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 PPP1R14CQ8TAE6 165 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 PHOSPHO1Q8TCT1 267 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 SFXN5Q8TD22 340 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 GPR119Q8TDV5 335 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 ROBO4Q8WZ75 1007 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 TRIM44Q96DX7 344 aaPredicted RBP13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 KLHL15Q96M94 604 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 PRPF18Q99633 342 aaKnown RBP13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 BHLHE41Q9C0J9 482 aaPredicted RBP13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 UBTD1Q9HAC8 227 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 ATAD3AQ9NVI7 634 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 FAF1Q9UNN5 650 aaPredicted RBP13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 CARD8Q9Y2G2 431 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 GPR52Q9Y2T5 361 aa13.21□□□□□ -0.29
SDCCAG3-209ENST00000468963 RAI1Q7Z5J4 1906 aaPredicted RBP13.21□□□□□ -0.3
SDCCAG3-209ENST00000468963 ZNF195O14628 629 aa13.2□□□□□ -0.3
SDCCAG3-209ENST00000468963 NTN1O95631 604 aa13.2□□□□□ -0.3
SDCCAG3-209ENST00000468963 TUBBP07437 444 aa13.2□□□□□ -0.3
SDCCAG3-209ENST00000468963 G6PDP11413 515 aa13.2□□□□□ -0.3
SDCCAG3-209ENST00000468963 PRPS1L1P21108 318 aa13.2□□□□□ -0.3
SDCCAG3-209ENST00000468963 ATP6V1C1P21283 382 aa13.2□□□□□ -0.3
SDCCAG3-209ENST00000468963 ME2P23368 584 aa13.2□□□□□ -0.3
SDCCAG3-209ENST00000468963 P2RX1P51575 399 aa13.2□□□□□ -0.3
SDCCAG3-209ENST00000468963 CLDN8P56748 225 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms