RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 CRYZQ08257 329 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 TCP10Q12799 353 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF177Q13360 481 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 PPIGQ13427 754 aaKnown RBP eCLIP4.54□□□□□ -1.683e-20■□□□□ 10.6
SF3B1-207ENST00000468925 ARHGEF7Q14155 803 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SEC23BQ15437 767 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SF1Q15637 639 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SLC25A52Q3SY17 297 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SLC35D3Q5M8T2 416 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SPOUT1Q5T280 376 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 CERCAMQ5T4B2 595 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ADGRF1Q5T601 910 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF660Q6AZW8 331 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 NADSYN1Q6IA69 706 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 APOBEC3HQ6NTF7 200 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 PLBD1Q6P4A8 553 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 CES3Q6UWW8 571 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 GLDNQ6ZMI3 551 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SLC16A13Q7RTY0 426 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 FJX1Q86VR8 437 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 PARGQ86W56 976 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 UNC93AQ86WB7 457 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 LDLRAD3Q86YD5 345 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 VRK3Q8IV63 474 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SERPINA12Q8IW75 414 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 DCUN1D3Q8IWE4 304 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ZBTB8OSQ8IWT0 167 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ADGRG2Q8IZP9 1017 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SYNE4Q8N205 404 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 PYROXD2Q8N2H3 581 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 COMMD1Q8N668 190 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 DNAJC5GQ8N7S2 189 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 GPRC5AQ8NFJ5 357 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 OR52N2Q8NGI0 321 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 OR5R1Q8NH85 324 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 TERB2Q8NHR7 220 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 RNF139Q8WU17 664 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 PIH1D2Q8WWB5 315 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 PHYHIPQ92561 330 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 C1GALT1C1Q96EU7 318 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SAT2Q96F10 170 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 TMEM169Q96HH4 297 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 C14orf144Q96I85 54 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 MRGPRX3Q96LB0 322 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 CCDC74BQ96LY2 380 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 C12orf66Q96MD2 445 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SLC6A18Q96N87 628 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 PTCHD1Q96NR3 888 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 WFIKKN1Q96NZ8 548 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 OR52E6Q96RD3 313 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 TRIB3Q96RU7 358 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ATOH8Q96SQ7 321 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 EGFL8Q99944 293 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 CMSS1Q9BQ75 279 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 GGACTQ9BVM4 153 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 FAIM2Q9BWQ8 316 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 JAM3Q9BX67 310 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 POLDIP3Q9BY77 421 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 DUSP16Q9BY84 665 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 MS4A7Q9GZW8 240 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 OR52A5Q9H2C5 316 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 UBQLN3Q9H347 655 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ALG9Q9H6U8 611 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 RNF167Q9H6Y7 350 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ACSS1Q9NUB1 689 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 TAS2R8Q9NYW2 309 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 NUDT4Q9NZJ9 180 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 VAPAQ9P0L0 249 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 GHRLQ9UBU3 117 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 POLLQ9UGP5 575 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 MRTO4Q9UKD2 239 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 CAMK2AQ9UQM7 478 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 CFAP20Q9Y6A4 193 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SIP14410 1827 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 A0A1W2PPC1 479 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 OR6C68A6NDL8 312 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 NEMP2A6NFY4 417 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 MARCH11A6NNE9 402 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 B9A039 149 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 H3BML4 177 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 H7C4K7 107 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 M0QYT0 321 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 TLR4O00206 839 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 LGALS8O00214 317 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 ITGB1BP1O14713 200 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 PGRMC2O15173 223 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 BCAT2O15382 392 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 B3GALT2O43825 422 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 MFSD11O43934 449 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 DNAJB6O75190 326 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 PRKRAO75569 313 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 RPP40O75818 363 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 GATBO75879 557 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 UBXN7O94888 489 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 NSA2O95478 260 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 ICAM1P05362 532 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 FHP07954 510 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 IL3P08700 152 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 HOXB5P09067 269 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms