RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 NPAS1Q99742 590 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 TUBA1CQ9BQE3 449 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 PIGQQ9BRB3 760 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 MED17Q9NVC6 651 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 SLC25A37Q9NYZ2 338 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 COQ3Q9NZJ6 369 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 Q9UFV3 132 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 VDAC3Q9Y277 283 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 CARD8Q9Y2G2 431 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 WDR45Q9Y484 360 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 A0A1W2PP18 115 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 C7orf72A4D263 438 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 CD8B2A6NJW9 211 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 SHISA8B8ZZ34 492 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 LINC01387J3KSC0 135 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 CHRM4P08173 479 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 ETFAP13804 333 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 PSMA4P25789 261 aaKnown RBP14.32□□□□□ -0.12
ERCC3-206ENST00000462306 GRNP28799 593 aaKnown RBP14.32□□□□□ -0.12
ERCC3-206ENST00000462306 CHRNB4P30926 498 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 CLDN15P56746 228 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 CHRNEQ04844 493 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 SRYQ05066 204 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 SF3B4Q15427 424 aaKnown RBP eCLIP14.32□□□□□ -0.122e-10■■■■■ 28
ERCC3-206ENST00000462306 PLPPR5Q32ZL2 321 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 NDUFAF6Q330K2 333 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 GPAT3Q53EU6 434 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 LACC1Q8IV20 430 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 ZNF619Q8N2I2 560 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 GTPBP8Q8N3Z3 284 aaPredicted RBP14.32□□□□□ -0.12
ERCC3-206ENST00000462306 OR10Q1Q8NGQ4 319 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 LILRB4Q8NHJ6 448 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 ASB5Q8WWX0 329 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 OIT3Q8WWZ8 545 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 ZNF317Q96PQ6 595 aaPredicted RBP14.32□□□□□ -0.12
ERCC3-206ENST00000462306 SLC38A1Q9H2H9 487 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 RUBCNLQ9H714 662 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 L3MBTL1Q9Y468 752 aa14.32□□□□□ -0.12
ERCC3-206ENST00000462306 TRBV5-3A0A0A0MS03 114 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 PRSS44E7EML9 344 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 H0Y3Z8 333 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 GTPBP1O00178 669 aaKnown RBP14.31□□□□□ -0.12
ERCC3-206ENST00000462306 CLIC1O00299 241 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 ZNF264O43296 627 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 EIF4E2O60573 245 aaKnown RBP14.31□□□□□ -0.12
ERCC3-206ENST00000462306 LINGO3P0C6S8 592 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 UBL4AP11441 157 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 PEPDP12955 493 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 ZNF17P17021 662 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 POU3F2P20265 443 aaPredicted RBP14.31□□□□□ -0.12
ERCC3-206ENST00000462306 HTR1EP28566 365 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 CEACAM8P31997 349 aaPredicted RBP14.31□□□□□ -0.12
ERCC3-206ENST00000462306 TIMP3P35625 211 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 CRATP43155 626 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 P2RX1P51575 399 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 ARFIP2P53365 341 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 SUMO3P55854 103 aaPredicted RBP14.31□□□□□ -0.12
ERCC3-206ENST00000462306 SF3A3Q12874 501 aaKnown RBP eCLIP14.31□□□□□ -0.123e-11■■□□□ 13.1
ERCC3-206ENST00000462306 SKP2Q13309 424 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 FGFBP1Q14512 234 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 RGNQ15493 299 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 LRRC74BQ6ZQY2 392 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 TNIP2Q8NFZ5 429 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 POC1BQ8TC44 478 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 GPR119Q8TDV5 335 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 CA5BP1Q8WTZ4 195 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 ZBTB8AQ96BR9 441 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 ZNF524Q96C55 264 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 UCN2Q96RP3 112 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 TRIB1Q96RU8 372 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 QRSL1Q9H0R6 528 aaKnown RBP14.31□□□□□ -0.12
ERCC3-206ENST00000462306 CALHM2Q9HA72 323 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 GMEB1Q9Y692 573 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 ARHGAP21Q5T5U3 1957 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 KIAA1549Q9HCM3 1950 aa14.31□□□□□ -0.12
ERCC3-206ENST00000462306 MBD3L4A6NDZ8 208 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-206ENST00000462306 MBD3L3A6NE82 208 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-206ENST00000462306 MBD3L5A6NJ08 208 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-206ENST00000462306 FAM47E-STBD1D6RA91 191 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 H0YC42 278 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 H3BML4 177 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 DNAJA2O60884 412 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 BCAS1O75363 584 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-206ENST00000462306 TFPTP0C1Z6 253 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 NR2F1P10589 423 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 ZNF41P51814 821 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-206ENST00000462306 SUCLG1P53597 346 aaKnown RBP14.3□□□□□ -0.12
ERCC3-206ENST00000462306 TPD52P55327 224 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-206ENST00000462306 CLDN20P56880 219 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 DSTNP60981 165 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 HPCAP84074 193 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 PLAURQ03405 335 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 TOMM34Q15785 309 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-206ENST00000462306 DLEU7Q6UYE1 221 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 EIF3MQ7L2H7 374 aaKnown RBP14.3□□□□□ -0.12
ERCC3-206ENST00000462306 HMGN2P46Q86SG4 172 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 LIX1LQ8IVB5 337 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 UBQLNLQ8IYU4 475 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 NAXEQ8NCW5 288 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 FAM71CQ8NEG0 241 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms