RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 BUD23O43709 281 aaKnown RBP4.34□□□□□ -1.71
COPS3-204ENST00000462236 KDM4BO94953 1096 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 CCDC172P0C7W6 258 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 MYBL1P10243 752 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 SELLP14151 372 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 PSMA3P25788 255 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 PTPN3P26045 913 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 EEF1DP29692 281 aaKnown RBP4.34□□□□□ -1.71
COPS3-204ENST00000462236 CCKARP32238 428 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 NR0B1P51843 470 aaKnown RBP4.34□□□□□ -1.71
COPS3-204ENST00000462236 ZNF140P52738 457 aaPredicted RBP4.34□□□□□ -1.71
COPS3-204ENST00000462236 KRTAP10-11P60412 298 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 WASHC5Q12768 1159 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 SNTA1Q13424 505 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 FASTKQ14296 549 aaKnown RBP4.34□□□□□ -1.71
COPS3-204ENST00000462236 SYCP1Q15431 976 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 TAF1AQ15573 450 aaPredicted RBP4.34□□□□□ -1.71
COPS3-204ENST00000462236 MEP1AQ16819 746 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 TPD52L1Q16890 204 aaPredicted RBP4.34□□□□□ -1.71
COPS3-204ENST00000462236 SLC25A35Q3KQZ1 300 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 FBXL19-AS1Q494R0 122 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 RTL6Q6ICC9 239 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 FRMPD2BQ6IN97 320 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 SLC25A25Q6KCM7 469 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 PRSS57Q6UWY2 283 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 GLT6D1Q7Z4J2 308 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 HOOK3Q86VS8 718 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 CRLF3Q8IUI8 442 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 PRSS58Q8IYP2 241 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 PM20D2Q8IYS1 436 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 C1orf87Q8N0U7 546 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 LRRC75A-AS1Q8N1F1 130 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 METTL27Q8N6F8 245 aaPredicted RBP4.34□□□□□ -1.71
COPS3-204ENST00000462236 LMNTD1Q8N9Z9 388 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 TTC29Q8NA56 475 aaPredicted RBP4.34□□□□□ -1.71
COPS3-204ENST00000462236 POGLUT1Q8NBL1 392 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 HEXDCQ8WVB3 486 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 ABTB1Q969K4 478 aaPredicted RBP4.34□□□□□ -1.71
COPS3-204ENST00000462236 PIGTQ969N2 578 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 SLC22A18Q96BI1 424 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 TMEM19Q96HH6 336 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 OXNAD1Q96HP4 312 aaPredicted RBP4.34□□□□□ -1.71
COPS3-204ENST00000462236 ADGRG7Q96K78 797 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 CSF3RQ99062 836 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 SELENOSQ9BQE4 189 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 RTN4RQ9BZR6 473 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 DENND2DQ9H6A0 471 aaPredicted RBP4.34□□□□□ -1.71
COPS3-204ENST00000462236 ASB8Q9H765 288 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 DDX31Q9H8H2 851 aaKnown RBP4.34□□□□□ -1.71
COPS3-204ENST00000462236 FKRPQ9H9S5 495 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 MRPL47Q9HD33 250 aaKnown RBP4.34□□□□□ -1.71
COPS3-204ENST00000462236 KLHL1Q9NR64 748 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 AIPL1Q9NZN9 384 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 TEKT2Q9UIF3 430 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 RPS6KA6Q9UK32 745 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 PCDHGB4Q9UN71 923 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 FAM215AQ9Y5M1 114 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 ARL5AQ9Y689 179 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 MEGF8Q7Z7M0 2845 aa4.34□□□□□ -1.72
COPS3-204ENST00000462236 A0A1W2PPV9 198 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 GABRR3A8MPY1 467 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 PES1O00541 588 aaKnown RBP4.33□□□□□ -1.72
COPS3-204ENST00000462236 SLC16A5O15375 505 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 STX7O15400 261 aaKnown RBP4.33□□□□□ -1.72
COPS3-204ENST00000462236 AVILO75366 819 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 CRLF1O75462 422 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 GOSR1O95249 250 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 ZNF23P17027 643 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 ZNF24P17028 368 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 KDELR1P24390 212 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 CXCR2P25025 360 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 ADRA1AP35348 466 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 PEX19P40855 299 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 ZFP36L2P47974 494 aaKnown RBP4.33□□□□□ -1.72
COPS3-204ENST00000462236 CLDN20P56880 219 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 VSX2P58304 361 aaPredicted RBP4.33□□□□□ -1.72
COPS3-204ENST00000462236 BRWD1-AS2P59051 145 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 SPOCK1Q08629 439 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 KRT81Q14533 505 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 SF3B4Q15427 424 aaKnown RBP eCLIP4.33□□□□□ -1.722e-6■■■□□ 16.9
COPS3-204ENST00000462236 GARNL3Q5VVW2 1013 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 LANCL3Q6ZV70 420 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 C16orf82Q7Z2V1 217 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 CPEB2Q7Z5Q1 589 aaKnown RBP4.33□□□□□ -1.72
COPS3-204ENST00000462236 SNX20Q7Z614 316 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 KLHDC8BQ8IXV7 354 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 ZFP62Q8NB50 900 aaPredicted RBP4.33□□□□□ -1.72
COPS3-204ENST00000462236 CCNYQ8ND76 341 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 NEK11Q8NG66 645 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 OR4K2Q8NGD2 314 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 OR13C4Q8NGS5 318 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 OR2L8Q8NGY9 312 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 OR5R1Q8NH85 324 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 LILRB1Q8NHL6 650 aaPredicted RBP4.33□□□□□ -1.72
COPS3-204ENST00000462236 HMGCLL1Q8TB92 370 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 M1APQ8TC57 530 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 BLOC1S5Q8TDH9 187 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 FAM222BQ8WU58 562 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 NUDCD2Q8WVJ2 157 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 FIG4Q92562 907 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms