RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SKP2Q13309 424 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 OR1C1Q15619 314 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 IQCCQ4KMZ1 466 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 TBCELQ5QJ74 424 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 PIWIL3Q7Z3Z3 882 aaKnown RBP12.85□□□□□ -0.35
SHMT2-203ENST00000449049 PSD4Q8NDX1 1056 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 MDS2Q8NDY4 140 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 OR6T1Q8NGN1 323 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 CHID1Q9BWS9 393 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 AMBRA1Q9C0C7 1298 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 PROK2Q9HC23 129 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 TIMMDC1Q9NPL8 285 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 SACM1LQ9NTJ5 587 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 WIF1Q9Y5W5 379 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 MED13Q9UHV7 2174 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 OIP5O43482 229 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 FRS3O43559 492 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 EIF4E2O60573 245 aaKnown RBP12.84□□□□□ -0.35
SHMT2-203ENST00000449049 IFNW1P05000 195 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 FABP3P05413 133 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 UBTFL6P0CB48 400 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-203ENST00000449049 ZNF136P52737 540 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 RGS8P57771 180 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-203ENST00000449049 CXADRP78310 365 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 ZNF117Q03924 483 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 C17orf67Q0P5P2 114 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 NPTX1Q15818 432 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 TBR1Q16650 682 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 NDUFAF6Q330K2 333 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 PRAMEF20Q5VT98 475 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 SPINK14Q6IE38 97 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 RBM45Q8IUH3 476 aaKnown RBP12.84□□□□□ -0.35
SHMT2-203ENST00000449049 ZDHHC21Q8IVQ6 265 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 ZNF440Q8IYI8 595 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 VANGL1Q8TAA9 524 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-203ENST00000449049 LAT2Q9GZY6 243 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 HHATLQ9HCP6 504 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 SDHAF3Q9NRP4 125 aa12.84□□□□□ -0.35
SHMT2-203ENST00000449049 IGLV3-32A0A0A0MS00 114 aa12.83□□□□□ -0.35
SHMT2-203ENST00000449049 C17orf51A8MQB3 221 aa12.83□□□□□ -0.35
SHMT2-203ENST00000449049 GTPBP1O00178 669 aaKnown RBP12.83□□□□□ -0.35
SHMT2-203ENST00000449049 P04436 131 aa12.83□□□□□ -0.35
SHMT2-203ENST00000449049 ITGB2P05107 769 aa12.83□□□□□ -0.35
SHMT2-203ENST00000449049 CBLN3Q6UW01 205 aa12.83□□□□□ -0.35
SHMT2-203ENST00000449049 ZNF550Q7Z398 422 aa12.83□□□□□ -0.35
SHMT2-203ENST00000449049 PHF10Q8WUB8 498 aaKnown RBP12.83□□□□□ -0.35
SHMT2-203ENST00000449049 NDUFAF4Q9P032 175 aa12.83□□□□□ -0.35
SHMT2-203ENST00000449049 CARD8Q9Y2G2 431 aa12.83□□□□□ -0.35
SHMT2-203ENST00000449049 hCG_2039718K7EN88 272 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 TPST2O60704 377 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 ADAM11O75078 769 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 SEMA7AO75326 666 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 SLC25A12O75746 678 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 MT-ND1P03886 318 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 GKN3PP0CG01 181 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 PRG2P13727 222 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 ACAA2P42765 397 aaKnown RBP12.83□□□□□ -0.36
SHMT2-203ENST00000449049 ARG2P78540 354 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 IGFL3Q6UXB1 125 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 TOR1AIP2Q8NFQ8 470 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 DUSP19Q8WTR2 217 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 TMEM41AQ96HV5 264 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 ZNF300Q96RE9 604 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-203ENST00000449049 PPP4R1LQ9P1A2 415 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 TESQ9UGI8 421 aaKnown RBP12.83□□□□□ -0.36
SHMT2-203ENST00000449049 ICAM5Q9UMF0 924 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 ENPP4Q9Y6X5 453 aa12.83□□□□□ -0.36
SHMT2-203ENST00000449049 C2orf72A6NCS6 295 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 B4DXG7 233 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 HNRNPRO43390 633 aaKnown RBP12.82□□□□□ -0.36
SHMT2-203ENST00000449049 FMO6PO60774 539 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 SNX4O95219 450 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 ITGA2P17301 1181 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 P2RX1P51575 399 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 EPS8Q12929 822 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 RANBP3LQ86VV4 465 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-203ENST00000449049 B4GALNT2Q8NHY0 566 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 PCDHGB7Q9Y5F8 929 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 HRH3Q9Y5N1 445 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 ZFHX4Q86UP3 3567 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 HCRTR2O43614 444 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 TRIM3O75382 744 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-203ENST00000449049 TIPRLO75663 272 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 CYP7B1O75881 506 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 CNR1P21554 472 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 MSX1P28360 303 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 TNFSF10P50591 281 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 SUMO3P55854 103 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-203ENST00000449049 HOXC5Q00444 222 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 DEF8Q6ZN54 512 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 SCMH1Q96GD3 660 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 SH3YL1Q96HL8 342 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-203ENST00000449049 MCHR1Q99705 422 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 SLC24A3Q9HC58 644 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 DEPPQ9NTK1 212 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 ETAA1Q9NY74 926 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 ACAD8Q9UKU7 415 aa12.82□□□□□ -0.36
SHMT2-203ENST00000449049 MKRN2OSH3BPM6 223 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 FAAHO00519 579 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 AP3D1O14617 1153 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms