RNA–Protein interactions for RNA: ENST00000446764.5

GARNL3-209, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-209	ENST00000446764	ADGRE4P	Q86SQ3	457 aa		18.83	■□□□□ 0.6
GARNL3-209	ENST00000446764	LIX1L	Q8IVB5	337 aa		18.83	■□□□□ 0.6
GARNL3-209	ENST00000446764	ZNF619	Q8N2I2	560 aa		18.83	■□□□□ 0.6
GARNL3-209	ENST00000446764	TNIP2	Q8NFZ5	429 aa		18.83	■□□□□ 0.6
GARNL3-209	ENST00000446764	AURKB	Q96GD4	344 aa	Predicted RBP	18.83	■□□□□ 0.6
GARNL3-209	ENST00000446764	TRNT1	Q96Q11	434 aa	Known RBP	18.83	■□□□□ 0.6
GARNL3-209	ENST00000446764	UCK2	Q9BZX2	261 aa		18.83	■□□□□ 0.6
GARNL3-209	ENST00000446764	RABEP2	Q9H5N1	569 aa		18.83	■□□□□ 0.6
GARNL3-209	ENST00000446764	CCDC134	Q9H6E4	229 aa		18.83	■□□□□ 0.6
GARNL3-209	ENST00000446764	LIPT1	Q9Y234	373 aa		18.83	■□□□□ 0.6
GARNL3-209	ENST00000446764	PCDHB14	Q9Y5E9	798 aa		18.83	■□□□□ 0.6
GARNL3-209	ENST00000446764		A0A096LPI6	279 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	C7orf72	A4D263	438 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	MBD3L4	A6NDZ8	208 aa	Predicted RBP	18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	MBD3L3	A6NE82	208 aa	Predicted RBP	18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	MBD3L5	A6NJ08	208 aa	Predicted RBP	18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	FAM90A27P	A6NNH2	459 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764		H3BML4	177 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	C19orf84	I3L1E1	186 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	H6PD	O95479	791 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	VIM	P08670	466 aa	Known RBP	18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	TROVE2	P10155	538 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	ETFA	P13804	333 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	ZNF17	P17021	662 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	HOXB9	P17482	250 aa	Predicted RBP	18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	ZNF41	P51814	821 aa	Predicted RBP	18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	SUMO3	P55854	103 aa	Predicted RBP	18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	CLDN15	P56746	228 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	PAGE3	Q5JUK9	113 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	METTL21C	Q5VZV1	264 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	CGB2	Q6NT52	195 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	UBQLNL	Q8IYU4	475 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	NAXE	Q8NCW5	288 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	ZBTB8A	Q96BR9	441 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	ZG16B	Q96DA0	208 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	TMEM120A	Q9BXJ8	343 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	CHST11	Q9NPF2	352 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	AP4B1	Q9Y6B7	739 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	FLNB	O75369	2602 aa	Known RBP	18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	MYO7B	Q6PIF6	2116 aa		18.82	■□□□□ 0.6
GARNL3-209	ENST00000446764	CLCA1	A8K7I4	914 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	HSPB2	A8KAH6	182 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764		H0YC42	278 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	ZNF264	O43296	627 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	EIF4E2	O60573	245 aa	Known RBP	18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	CHRM4	P08173	479 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	LINGO3	P0C6S8	592 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	UBL4A	P11441	157 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	PSMA4	P25789	261 aa	Known RBP	18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	MDH1	P40925	334 aa	Known RBP	18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	CRAT	P43155	626 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	SUCLG1	P53597	346 aa	Known RBP	18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	TPD52	P55327	224 aa	Predicted RBP	18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	HPCA	P84074	193 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	GTF3C1	Q12789	2109 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	MAPK11	Q15759	364 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	HSPB2	Q16082	182 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	LRIF1	Q5T3J3	769 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	LRRC74B	Q6ZQY2	392 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	MEIOB	Q8N635	442 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	C9orf106	Q8NAJ2	232 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	POC1B	Q8TC44	478 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	OIT3	Q8WWZ8	545 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	UCN2	Q96RP3	112 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	SLC38A1	Q9H2H9	487 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	SLAMF8	Q9P0V8	285 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	L3MBTL1	Q9Y468	752 aa		18.81	■□□□□ 0.6
GARNL3-209	ENST00000446764	PTPN13	Q12923	2485 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764		A0A1W2PP18	115 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	NKX2-6	A6NCS4	301 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	CLIC1	O00299	241 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	NUDT14	O95848	222 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	IL2RA	P01589	272 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	NR2F1	P10589	423 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	CLDN20	P56880	219 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	SF3A3	Q12874	501 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	FGFBP1	Q14512	234 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	PLXDC2	Q6UX71	529 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	HMGN2P46	Q86SG4	172 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	MSRB3	Q8IXL7	192 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	OR5W2	Q8NH69	310 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	GPR119	Q8TDV5	335 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	SMPDL3B	Q92485	455 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	RNF145	Q96MT1	663 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	LAT2	Q9GZY6	243 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	QRSL1	Q9H0R6	528 aa	Known RBP	18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	RUBCNL	Q9H714	662 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	KCNJ16	Q9NPI9	418 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	SLC25A37	Q9NYZ2	338 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	CLCF1	Q9UBD9	225 aa		18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	NCOA6	Q14686	2063 aa	Predicted RBP	18.8	■□□□□ 0.6
GARNL3-209	ENST00000446764	SEC14L5	O43304	696 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	CSTA	P01040	98 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	PGM1	P36871	562 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	ZNF136	P52737	540 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	ARFIP2	P53365	341 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	EEFSEC	P57772	596 aa	Known RBP	18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	DSTN	P60981	165 aa		18.79	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms