RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 LCA5LO95447 670 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 IGHV3-9P01782 118 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 RHOXF2BP0C7M4 288 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 POLR2MP0CAP2 368 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZCCHC18P0CG32 403 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 EPB41P11171 864 aaKnown RBP3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 HSD17B1P14061 328 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 TCP1P17987 556 aaKnown RBP3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 RPA1P27694 616 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 PPP2R1BP30154 601 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 SAA4P35542 130 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 MAGEA1P43355 309 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 KLK7P49862 253 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 SSTP61278 116 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 KLRC3Q07444 240 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 SMC1AQ14683 1233 aaKnown RBP3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 CD226Q15762 336 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 SHROOM1Q2M3G4 852 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 ACER2Q5QJU3 275 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 ATRAIDQ6UW56 229 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 ADAMTSL5Q6ZMM2 481 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZNF600Q6ZNG1 722 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 AMZ2Q86W34 360 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 NELFCDQ8IXH7 590 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 BATF2Q8N1L9 274 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 RNF10Q8N5U6 811 aaKnown RBP3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 CAPZA3Q96KX2 299 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 RUFY1Q96T51 708 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 C19orf43Q9BQ61 176 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 RHOXF2Q9BQY4 288 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 SYTL2Q9HCH5 934 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 AMBNQ9NP70 447 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 AGPAT5Q9NUQ2 364 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 RNF14Q9UBS8 474 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 IL19Q9UHD0 177 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 TRAF3IP3Q9Y228 551 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 RPH3AQ9Y2J0 694 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 BZW2Q9Y6E2 419 aaKnown RBP3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZNF646O15015 1829 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 TNS1Q9HBL0 1735 aaKnown RBP3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 ATP8B3O60423 1300 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 FRMPD4Q14CM0 1322 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 SCN9AQ15858 1988 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 ATAD5Q96QE3 1844 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 TRAV9-2A0A087WT02 112 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 SAP18O00422 153 aaKnown RBP3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 PHOX2AO14813 284 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 MSH4O15457 936 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 LRRTM2O43300 516 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 FLOT1O75955 427 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 GOT2P00505 430 aaKnown RBP3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 PIGRP01833 764 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 SLC4A1P02730 911 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 CCDC172P0C7W6 258 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 CYP11B1P15538 503 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 GNSP15586 552 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 ACP1P24666 158 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 HMGCLP35914 325 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 BRCC3P46736 316 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 SGSHP51688 502 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 MFAP2P55001 183 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 VCPP55072 806 aaKnown RBP3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 STARD6P59095 220 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 POLR2FP61218 127 aaKnown RBP3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 VSNL1P62760 191 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 KLHL30Q0D2K2 578 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 CASP8Q14790 479 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 EXOC3L4Q17RC7 722 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZNF699Q32M78 642 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 CFAP221Q4G0U5 840 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 BEND6Q5SZJ8 279 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 SEL1L2Q5TEA6 688 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 FKBP1CQ5VVH2 108 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 RNLSQ5VYX0 342 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 APOOLQ6UXV4 268 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 WDR88Q6ZMY6 472 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 PRSS48Q7RTY5 328 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 SLC22A18ASQ8N1D0 253 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 COLGALT1Q8NBJ5 622 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 SCFD1Q8WVM8 642 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 FAM151AQ8WW52 585 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 CRYGNQ8WXF5 182 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 TAF4BQ92750 862 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 TMEM186Q96B77 213 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 MCCC1Q96RQ3 725 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 APOL2Q9BQE5 337 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 CRACR2AQ9BSW2 395 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 TEKT3Q9BXF9 490 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 TDRD3Q9H7E2 651 aaKnown RBP3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 PARVGQ9HBI0 331 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 MED4Q9NPJ6 270 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 CIDEBQ9UHD4 219 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZNF107Q9UII5 783 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 ODF2LQ9ULJ1 636 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 SNX12Q9UMY4 172 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 AGRNO00468 2067 aa3.43□□□□□ -1.86
HMGB3P6-201ENST00000444896 IGHV3OR16-12A0A075B7B8 117 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 CLRN2A0PK11 232 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 ARHGEF35A5YM69 484 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 BTNL10A8MVZ5 291 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms