RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 LRFN5Q96NI6 719 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 CMKLR1Q99788 373 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ZPBPQ9BS86 351 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 SIDT1Q9NXL6 827 aaKnown RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 DNAJB12Q9NXW2 375 aaKnown RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 SLC39A1Q9NY26 324 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ERGIC3Q9Y282 383 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 TMEM184BQ9Y519 407 aaPredicted RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 PCDHGB6Q9Y5F9 930 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 CEPT1Q9Y6K0 416 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 PCNTO95613 3336 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 TRANK1O15050 2925 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 KNL1Q8NG31 2342 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 IDSB3KWA1 339 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 NPIPB9F8W1W9 429 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 H3BSA7 217 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 NTN3O00634 580 aaPredicted RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 FADS2O95864 444 aaKnown RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 DDAH2O95865 285 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 NGFRP08138 427 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 GKN3PP0CG01 181 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 CT45A8P0DMV1 189 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 CT45A9P0DMV2 189 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 SAGP10523 405 aaPredicted RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 MYL12AP19105 171 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 PGCP20142 388 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 TBXA2RP21731 343 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 PAICSP22234 425 aaKnown RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 ACP1P24666 158 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 SLC9A3P48764 834 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 NR0B1P51843 470 aaKnown RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 PRKCDQ05655 676 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 EBPQ15125 230 aaKnown RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 NNATQ16517 81 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 PGGHGQ32M88 737 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 CT45A2Q5DJT8 189 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ZNF574Q6ZN55 896 aaPredicted RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 PRICKLE2Q7Z3G6 844 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ANKRD37Q7Z713 158 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 GID4Q8IVV7 300 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 NKAIN4Q8IVV8 208 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 FAM26EQ8N5C1 309 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 TCEANCQ8N8B7 351 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 SIMC1Q8NDZ2 872 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 B3GNT7Q8NFL0 401 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 OR13F1Q8NGS4 319 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ZNF563Q8TA94 476 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 BRIX1Q8TDN6 353 aaKnown RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 GRHL3Q8TE85 626 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ZNF721Q8TF20 911 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 SLC19A3Q9BZV2 496 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 WWTR1Q9GZV5 400 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 LAT2Q9GZY6 243 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 NXF5Q9H1B4 397 aaKnown RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 WDR54Q9H977 334 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 SDHAF3Q9NRP4 125 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 FBXO34Q9NWN3 711 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ZNF226Q9NYT6 803 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 CHD7Q9P2D1 2997 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.56□□□□□ -1.52
VPS50-205ENST00000441602 EML5Q05BV3 1969 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 BRCA2P51587 3418 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 A0A1W2PQD3 144 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 RIIAD1A6NNX1 92 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 ZNF264O43296 627 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 WBP4O75554 376 aaKnown RBP5.55□□□□□ -1.52
VPS50-205ENST00000441602 SEC14L2O76054 403 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 ZFAND5O76080 213 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 IGKV3-11P04433 115 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 GP1BBP13224 206 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 NAGAP17050 411 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 CCNA2P20248 432 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 DCKP27707 260 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 CCKBRP32239 447 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 SOX18P35713 384 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 OMPP47874 163 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 SERPINB10P48595 397 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 HOXC5Q00444 222 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 PMS2P3Q13401 168 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 ARMC4Q5T2S8 1044 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 FAAH2Q6GMR7 532 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 PWWP2BQ6NUJ5 590 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 PAPD4Q6PIY7 484 aaKnown RBP5.55□□□□□ -1.52
VPS50-205ENST00000441602 COMTD1Q86VU5 262 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 LSMEM1Q8N8F7 131 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 OR2I1PQ8NGU4 316 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 OR8K3Q8NH51 312 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 TMEM163Q8TC26 289 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 TMCO6Q96DC7 493 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 MRPL48Q96GC5 212 aaKnown RBP5.55□□□□□ -1.52
VPS50-205ENST00000441602 RBM38Q9H0Z9 239 aaKnown RBP5.55□□□□□ -1.52
VPS50-205ENST00000441602 SLC26A1Q9H2B4 701 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 C12orf10Q9HB07 376 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 FBXO8Q9NRD0 319 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 CTSFQ9UBX1 484 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 CLDN16Q9Y5I7 305 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 A0A0B4J2E0 115 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 A0A1B0GX12 115 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 MEN1O00255 615 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 MYL12BO14950 172 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms