RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TSPAN2O60636 221 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 SCGB2A1O75556 95 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 ERLIN2O94905 339 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 MFN2O95140 757 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 OTCP00480 354 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 SERPINA3P01011 423 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 CXCL10P02778 98 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 UQCRFS1P1P0C7P4 283 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 LAMP1P11279 417 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 POU2F1P14859 743 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 UGT1A6P19224 532 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 DRD5P21918 477 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 UCP1P25874 307 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 PRDX6P30041 224 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 PPP1R2P41236 205 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 MAGEA1P43355 309 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 POU3F4P49335 361 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 P2RY4P51582 365 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 STX17P56962 302 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 RWDD2BP57060 319 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 SRP54P61011 504 aaKnown RBP2.29□□□□□ -2.04
CLK1-204ENST00000432425 CD47Q08722 323 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 ASPHQ12797 758 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 PPIL2Q13356 520 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 SNTB2Q13425 540 aaKnown RBP2.29□□□□□ -2.04
CLK1-204ENST00000432425 WDR43Q15061 677 aaKnown RBP eCLIP2.29□□□□□ -2.04
CLK1-204ENST00000432425 NCF4Q15080 339 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 NADK2Q4G0N4 442 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 BCL7AQ4VC05 210 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 GPAT3Q53EU6 434 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 LDLRAP1Q5SW96 308 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 ZNF658Q5TYW1 1059 aaPredicted RBP2.29□□□□□ -2.04
CLK1-204ENST00000432425 RHBDD2Q6NTF9 364 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 PPP1R2P3Q6NXS1 205 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 ZNF573Q86YE8 665 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 TMEM126BQ8IUX1 230 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 LAX1Q8IWV1 398 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 MINDY2Q8NBR6 621 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 CLHC1Q8NHS4 586 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 CCDC26Q8TAB7 109 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 ZNF564Q8TBZ8 553 aaPredicted RBP2.29□□□□□ -2.04
CLK1-204ENST00000432425 SELENOMQ8WWX9 145 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 NT5C3BQ969T7 300 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 ZNF707Q96C28 371 aaPredicted RBP2.29□□□□□ -2.04
CLK1-204ENST00000432425 C7orf34Q96L11 122 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 CXorf58Q96LI9 332 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 ALS2CR12Q96Q35 445 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 COQ7Q99807 217 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 TPPP3Q9BW30 176 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 CRNKL1Q9BZJ0 848 aaKnown RBP2.29□□□□□ -2.04
CLK1-204ENST00000432425 SLC26A1Q9H2B4 701 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 METTL7AQ9H8H3 244 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 LRRC40Q9H9A6 602 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 RNPEPL1Q9HAU8 725 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 ADGRL4Q9HBW9 690 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 MRPL47Q9HD33 250 aaKnown RBP2.29□□□□□ -2.04
CLK1-204ENST00000432425 TREM1Q9NP99 234 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 AGPAT5Q9NUQ2 364 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 TRIM10Q9UDY6 481 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 HMGXB4Q9UGU5 601 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 TIMM22Q9Y584 194 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 ATP6V1DQ9Y5K8 247 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 AP4B1Q9Y6B7 739 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 U3KQV3 271 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 SMARCA2P51531 1590 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 UBE4BO95155 1302 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 DCAF1Q9Y4B6 1507 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 CHD4Q14839 1912 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 BTBD17A6NE02 478 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 ZFP92A6NM28 416 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 LRRIQ3A6PVS8 624 aaPredicted RBP2.28□□□□□ -2.04
CLK1-204ENST00000432425 K7ERQ8 282 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 CLDN3O15551 220 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 SULT1B1O43704 296 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 ZNF189O75820 626 aaPredicted RBP2.28□□□□□ -2.04
CLK1-204ENST00000432425 CIB2O75838 187 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 IL1BP01584 269 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 KRT8P05787 483 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 FCER2P06734 321 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 THRBP10828 461 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 CLUP10909 449 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 RALBP11234 206 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 CCDC130P13994 396 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 CPN2P22792 545 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 U2AF2P26368 475 aaKnown RBP eCLIP2.28□□□□□ -2.049e-7■■■□□ 14.9
CLK1-204ENST00000432425 CCND2P30279 289 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 AXLP30530 894 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 TUFMP49411 452 aaKnown RBP2.28□□□□□ -2.04
CLK1-204ENST00000432425 MAP3K7CLP57077 242 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 ACTR3P61158 418 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 FUT7Q11130 342 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 ASAH1Q13510 395 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 QRICH1Q2TAL8 776 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 LRRC23Q53EV4 343 aaPredicted RBP2.28□□□□□ -2.04
CLK1-204ENST00000432425 IFI44LQ53G44 452 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 ZNF789Q5FWF6 425 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 CFAP157Q5JU67 520 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 SPATA46Q5T0L3 261 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 KCTD11Q693B1 232 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 ATL3Q6DD88 541 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms