RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 TAAR2Q9P1P5 351 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 PCDHB8Q9UN66 801 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 IGLV3-16A0A075B6K0 115 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 A0A087WUU8 490 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 A0A0B4J203 849 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 A0A0G2JPF8 293 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 HNRNPCL3B7ZW38 293 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 GPR31O00270 319 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 EGFP01133 1207 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 ASGR2P07307 311 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 HNRNPCL4P0DMR1 293 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 SPP1P10451 314 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 RPA2P15927 270 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 ANXA7P20073 488 aaKnown RBP7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 SLC11A2P49281 568 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 H2BFSP57053 126 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 NAE1Q13564 534 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 IRF5Q13568 498 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 KCNA10Q16322 511 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 MAPK14Q16539 360 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 MED27Q6P2C8 311 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 AGTRAPQ6RW13 159 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 APOOLQ6UXV4 268 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 FAM83HQ6ZRV2 1179 aaPredicted RBP7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 MOB3CQ70IA8 216 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 MRPL10Q7Z7H8 261 aaKnown RBP7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF467Q7Z7K2 595 aaPredicted RBP7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 SVBPQ8N300 66 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 TEX19Q8NA77 164 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 MYEF2Q9P2K5 600 aaKnown RBP7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 DTX4Q9Y2E6 619 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 PRKAB1Q9Y478 270 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 PLEKHM1Q9Y4G2 1056 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 PLXND1Q9Y4D7 1925 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 HMGN4O00479 90 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 SEPT4O43236 478 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 EIF1BO60739 113 aaKnown RBP7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 EPXP11678 715 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 GJA1P17302 382 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 EIF1P41567 113 aaKnown RBP7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 CAPZA2P47755 286 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 KCNJ3P48549 501 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 AP1S1P61966 158 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 FAM26DQ5JW98 314 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 CORO6Q6QEF8 472 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 UQCC3Q6UW78 93 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF783Q6ZMS7 281 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 CHST9Q7L1S5 443 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 LILRB2Q8N423 598 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 OR51G2Q8NGK0 314 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 OR6T1Q8NGN1 323 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 OR1F2PQ96R84 312 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 PDCD10Q9BUL8 212 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 BCL2L14Q9BZR8 327 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 RNF181Q9P0P0 153 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 FCF1Q9Y324 198 aaKnown RBP7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 PCDHGA5Q9Y5G8 931 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 CASP8AP2Q9UKL3 1982 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 CHD9Q3L8U1 2897 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 SOCS6O14544 535 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF749O43361 778 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 GATCO43716 136 aaKnown RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 ATP1B1P05026 303 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 CNR1P21554 472 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 IFNGR2P38484 337 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 STAT5AP42229 794 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 PSEN2P49810 448 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 GMFBP60983 142 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 DCDP81605 110 aaKnown RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 TNFRSF17Q02223 184 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 IL10RAQ13651 578 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 KRT33BQ14525 404 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 OLFML2AQ68BL7 652 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 DHRS7BQ6IAN0 325 aaPredicted RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 CBLN2Q8IUK8 224 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 KLHDC8AQ8IYD2 350 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 IZUMO1Q8IYV9 350 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 OR5M1Q8NGP8 315 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 OR6K2Q8NGY2 324 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 CMSS1Q9BQ75 279 aaKnown RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 ORAI3Q9BRQ5 295 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 OR51I1Q9H343 314 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 ELAC1Q9H777 363 aaKnown RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 MIEF1Q9NQG6 463 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 SPHK1Q9NYA1 384 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 CNIH4Q9P003 139 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 STOX2Q9P2F5 926 aaPredicted RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 SCN10AQ9Y5Y9 1956 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 GABARAPH6UMI1 98 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 SAP18O00422 153 aaKnown RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 IL3P08700 152 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 UBBP0CG47 229 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 UBCP0CG48 685 aaKnown RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 PNLIPRP1P54315 467 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 RPS27AP62979 156 aaKnown RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 UBA52P62987 128 aaKnown RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 LINC00303Q3SY05 128 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 CST9Q5W186 159 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 ELP2Q6IA86 826 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 DBX2Q6ZNG2 339 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms