RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 KEAP1Q14145 624 aa17.1■□□□□ 0.33
CIRBP-202ENST00000413636 EXOC3L2Q2M3D2 409 aa17.1■□□□□ 0.33
CIRBP-202ENST00000413636 EIPR1Q53HC9 387 aa17.1■□□□□ 0.33
CIRBP-202ENST00000413636 DCST2Q5T1A1 773 aa17.1■□□□□ 0.33
CIRBP-202ENST00000413636 B3GNTL1Q67FW5 361 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-202ENST00000413636 TYW3Q6IPR3 259 aaKnown RBP17.1■□□□□ 0.33
CIRBP-202ENST00000413636 LINC00471Q8N535 108 aa17.1■□□□□ 0.33
CIRBP-202ENST00000413636 C17orf47Q8NEP4 570 aa17.1■□□□□ 0.33
CIRBP-202ENST00000413636 PIK3R3Q92569 461 aa17.1■□□□□ 0.33
CIRBP-202ENST00000413636 TP53INP1Q96A56 240 aa17.1■□□□□ 0.33
CIRBP-202ENST00000413636 ALPK1Q96QP1 1244 aa17.1■□□□□ 0.33
CIRBP-202ENST00000413636 RSPO3Q9BXY4 272 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-202ENST00000413636 POFUT2Q9Y2G5 429 aa17.1■□□□□ 0.33
CIRBP-202ENST00000413636 PTPRQQ9UMZ3 2332 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 FRG2CA6NGY1 282 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 SMNDC1O75940 238 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■■□□□ 12.8
CIRBP-202ENST00000413636 DBIP07108 87 aaKnown RBP17.09■□□□□ 0.33
CIRBP-202ENST00000413636 H1F0P07305 194 aaKnown RBP17.09■□□□□ 0.33
CIRBP-202ENST00000413636 LAPTM4AQ15012 233 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 DEF8Q6ZN54 512 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 RPS19BP1Q86WX3 136 aaKnown RBP17.09■□□□□ 0.33
CIRBP-202ENST00000413636 ZNF619Q8N2I2 560 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 OR4N2Q8NGD1 307 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 OR52J3Q8NH60 311 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 VANGL1Q8TAA9 524 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-202ENST00000413636 FEVQ99581 238 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 ARHGDIGQ99819 225 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 GRIP2Q9C0E4 1043 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 ARMC7Q9H6L4 198 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 NMNAT1Q9HAN9 279 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-202ENST00000413636 Q9N2J8 555 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 ZMIZ1Q9ULJ6 1067 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 OR10H1Q9Y4A9 318 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 ZFHX4Q86UP3 3567 aa17.09■□□□□ 0.33
CIRBP-202ENST00000413636 GXYLT2A0PJZ3 443 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 FCMRO60667 390 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 OR2J2O76002 312 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 CLIC3O95833 236 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 CLPTM1O96005 669 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 RYKP34925 604 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 MLF1P58340 268 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 GANABQ14697 944 aaKnown RBP17.08■□□□□ 0.32
CIRBP-202ENST00000413636 DCST1Q5T197 706 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 ANKRD34AQ69YU3 496 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 OFCC1Q8IZS5 231 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 ZNF786Q8N393 782 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 TSPAN14Q8NG11 270 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 LMF1Q96S06 567 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 PAPOLBQ9NRJ5 636 aaKnown RBP17.08■□□□□ 0.32
CIRBP-202ENST00000413636 TUBA8Q9NY65 449 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-202ENST00000413636 GPR83Q9NYM4 423 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 MKLN1Q9UL63 735 aa17.08■□□□□ 0.32
CIRBP-202ENST00000413636 DMXL2Q8TDJ6 3036 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 A0A1W2PRQ8 180 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 DPPA5A6NC42 116 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 AGAP5A6NIR3 686 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 FAAHO00519 579 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 FFAR1O14842 300 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 BCKDKO14874 412 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 ZNF354AO60765 605 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-202ENST00000413636 ITGA10O75578 1167 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 UGT2B17O75795 530 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 NADKO95544 446 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-202ENST00000413636 IL7RP16871 459 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 ST13P50502 369 aaKnown RBP17.07■□□□□ 0.32
CIRBP-202ENST00000413636 TUBA4AP68366 448 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 IL1RL1Q01638 556 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 NPRL3Q12980 569 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 DGCR6Q14129 220 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 ACER2Q5QJU3 275 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 ZNF691Q5VV52 312 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 OLIG3Q7RTU3 272 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 GALNT5Q7Z7M9 940 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 PRR22Q8IZ63 422 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 ARMC10Q8N2F6 343 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 OR4D11Q8NGI4 311 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 SNRNP27Q8WVK2 155 aaKnown RBP17.07■□□□□ 0.32
CIRBP-202ENST00000413636 HSPBAP1Q96EW2 488 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 PRRC1Q96M27 445 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 APOL4Q9BPW4 351 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 FNDC11Q9BVV2 318 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 GABARAPL3Q9BY60 117 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 RIBC2Q9H4K1 309 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 ZNF443Q9Y2A4 671 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-202ENST00000413636 CPAMD8Q8IZJ3 1885 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 TO15178 435 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 KIAA0513O60268 411 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 MITFO75030 526 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-202ENST00000413636 EPPINO95925 133 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 RPS4Y1P22090 263 aaKnown RBP17.07■□□□□ 0.32
CIRBP-202ENST00000413636 TRHRP34981 398 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-202ENST00000413636 PIGAP37287 484 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 NRG3P56975 720 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 TOP3AQ13472 1001 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-202ENST00000413636 MEP1AQ16819 746 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 LIN52Q52LA3 116 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 RBM48Q5RL73 367 aaKnown RBP17.07■□□□□ 0.32
CIRBP-202ENST00000413636 VRK2Q86Y07 508 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 FDCSPQ8NFU4 85 aa17.07■□□□□ 0.32
CIRBP-202ENST00000413636 OR6T1Q8NGN1 323 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms