RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 BCORQ6W2J9 1755 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 SCN7AQ01118 1682 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 DUOX1Q9NRD9 1551 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 A0A087X002 238 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 IGKV6D-41A0A0C4DH26 115 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 TRBV5-4A0A0C4DH59 114 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 MBLAC1A4D2B0 266 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 SMCO2A6NFE2 343 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 USP27XA6NNY8 438 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 ARHGEF33A8MVX0 844 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 PPIAL4DF5H284 164 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 H0YL77 283 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 K7EQM0 130 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 KIF2AO00139 706 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 LAD1O00515 517 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 XPO1O14980 1071 aaKnown RBP3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 RIPK2O43353 540 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 PRAMEF12O95522 483 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 GOT2P00505 430 aaKnown RBP3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 UGT2B4P06133 528 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 GOLGA8HP0CJ92 632 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 CLUP10909 449 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 UGT1A4P22310 534 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 UCP1P25874 307 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 CASP1P29466 404 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 GNA11P29992 359 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 SPRP35270 261 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 DLSTP36957 453 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 CAPGP40121 348 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 VCPP55072 806 aaKnown RBP3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 CALCOCO2Q13137 446 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 TMEM187Q14656 261 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 ZNF146Q15072 292 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 CEP55Q53EZ4 464 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 APOOLQ6UXV4 268 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 Q7L0L9 218 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 LRRC70Q7Z2Q7 622 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 MTERF4Q7Z6M4 381 aaKnown RBP3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 CATSPER3Q86XQ3 398 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 ARL14Q8N4G2 192 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 CCDC112Q8NEF3 446 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 CCDC148Q8NFR7 591 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 STEAP2Q8NFT2 490 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 RAET1EQ8TD07 263 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 LRRC15Q8TF66 581 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 NPRL2Q8WTW4 380 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 CCDC12Q8WUD4 166 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 TADA1Q96BN2 335 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 UPRTQ96BW1 309 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 C4orf36Q96KX1 117 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 ZNF607Q96SK3 696 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 HSD17B14Q9BPX1 270 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 MCRIP2Q9BUT9 160 aaKnown RBP3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 NFKBIZQ9BYH8 718 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 C6orf50Q9HD87 102 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 SAMSN1Q9NSI8 373 aaKnown RBP3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 TAS2R16Q9NYV7 291 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 C4AP0C0L4 1744 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 C4BP0C0L5 1744 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 CACNA1SQ13698 1873 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 LAMB2P55268 1798 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 GRIN2DO15399 1336 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 NHSQ6T4R5 1651 aa3.94□□□□□ -1.78
HMGB3P18-201ENST00000406327 LAMA4Q16363 1823 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 DOCK2Q92608 1830 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 ESYT2A0FGR8 921 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 PRR23AA6NEV1 266 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 ASB14A6NK59 587 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 H3BMH7 237 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 IDH3BO43837 385 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 ZSCAN5DPP0CG00 497 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 PDHBP11177 359 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 RPS2P15880 293 aaKnown RBP3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 SAA4P35542 130 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 CYLC1P35663 651 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 FKBP1AP62942 108 aaKnown RBP3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 CBX1P83916 185 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 CSTF1Q05048 431 aaKnown RBP3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 LRRC74AQ0VAA2 488 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 CHIT1Q13231 466 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 ORC2Q13416 577 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 MESDQ14696 234 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 PDK3Q15120 406 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 SYCP1Q15431 976 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 CD226Q15762 336 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 ZNF658Q5TYW1 1059 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 WDR25Q64LD2 544 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 SPECC1LQ69YQ0 1117 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 REP15Q6BDI9 236 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 CENPPQ6IPU0 288 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 APOBEC3HQ6NTF7 200 aaKnown RBP3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 FAAP20Q6NZ36 180 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 SCYL2Q6P3W7 929 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 APTXQ7Z2E3 356 aaKnown RBP3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 ERICH1Q86X53 443 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 AQP11Q8NBQ7 271 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 PNPT1Q8TCS8 783 aaKnown RBP3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 SPRYD4Q8WW59 207 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 SHC3Q92529 594 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 NABP1Q96AH0 204 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms